Manihot esculenta (cassava): 110628222
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Entry
110628222 CDS
T05761
Name
(RefSeq) integrator complex subunit 9 homolog isoform X1
KO
K13146
integrator complex subunit 9
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mesc03041
]
110628222
Spliceosome [BR:
mesc03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
110628222
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GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
ACCA_BT
Motif
Other DBs
NCBI-GeneID:
110628222
NCBI-ProteinID:
XP_021630463
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Position
12:complement(1957378..1963977)
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AA seq
705 aa
AA seq
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MKFTCLSKGNGFHFPPCYVLHVNGYRVLLDCPLDLSALTIFSPVPADFCPLVLDESSNCS
VHESLDMGSESAKRHKIEKPLDAKDLIYAEPWYKTLKNLHIWDPSFFDIVLISSTMGMLG
LPFLTRSKGFSAKIYATEATARLGQLMLEDLVSMQMELRHFYGSEESDSPQWMKWEELEL
LPSPLREVAVGQDGSELGGWMPLYSSVDVKDCLQKIQKLKYAEATCHNGALVLKAFSSGL
EIGSCNWTVESPEGSISCLSSSIFVSAHAMDFDYHALQGTDMILYSDFTSEDVIEDVEHH
DNYSASATNSLSTLSDEHGWRELNECLSSNDESIEESKKLAFICSCVVDSVKAGGSVLIP
LNQLGIVLQLLEQIPNFLESSAVKVPMYVISSVAAELLAFTNRIPEWLSKLRQEKLFSGE
PLFSHIELIKGKKLHVFPAIHSPNLIANWQEPCIIFAPHWTLRLGPIVHLLRRWCGDQNS
LLVLQDGLDVDMALLPFKPIAMKVLHCSFLSGMRMRKAQLLLKMLQPKIVVFPEVLKQQI
NVSKSSSHSFSILYYKENETIDIRSLKDNSVLEIATGLATRFRWRKLVQNNMDVTRLEGQ
LLIDESKYWLVSGNKVSDTSQNRPLLYCGLLDMGKLLTILSKMGINGSIEQGMNAAESES
VGIIKIHDPNKAMIEVKATSTVISASDENLAARIFEAITSLLDGI
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttacatgcttgagcaaaggaaatggtttccattttcccccatgttatgttctc
catgtgaatgggtatagggtattgcttgattgcccactggacctttcagctctcacaatt
ttttctcctgttcctgctgatttttgtcccttggtgcttgatgaatcttccaattgttcg
gtccatgaatccttggatatgggatcagagagtgcaaagaggcataaaattgaaaagccc
cttgatgcaaaagatttaatatatgcagagccatggtacaaaactttaaagaacttgcac
atttgggatccttctttttttgatatagtattgatttcaagtacaatgggcatgcttggt
ttaccatttctcactcgaagtaaaggtttttctgcaaagatatacgcaactgaagcaact
gcaaggcttgggcagcttatgttggaggatcttgtttcaatgcagatggaactccgtcat
ttctatggttctgaggagtctgattctcctcaatggatgaagtgggaagagcttgaatta
cttccatctcctcttagggaagttgctgtaggtcaagatggatcagagctgggtggatgg
atgccactgtacagttctgtggatgtaaaggattgtctgcaaaagattcaaaagctgaag
tatgctgaagcaacctgccataatggggcattggtgttaaaggcatttagttcaggctta
gaaataggctcttgtaattggactgttgaaagcccagaaggaagtatttcatgtttatca
agctctatatttgtgtctgctcatgcgatggattttgactatcatgctttgcaagggact
gatatgatcttgtattcagacttcacatctgaggatgtgatagaagatgttgaacatcat
gataactattctgcttcagctactaacagtctgtcaactctcagtgatgaacatggttgg
agagaattgaatgaatgcttatcgagtaatgatgagagcatagaggaaagtaagaaacta
gcttttatatgctcatgtgttgtggattctgttaaggctggtggttctgtcctcattccc
ttgaatcaacttgggattgttctgcagttgctggagcagataccgaatttccttgaatct
tcagctgtaaaggttccaatgtatgttatctcttctgtagcggcagagctactggcattc
actaatcgcataccagaatggctgtccaagctccggcaagagaaactgttttctggtgag
ccattgttttcgcacatcgagctcattaaaggaaagaagcttcatgtgtttcctgctatt
cattcgcccaacctaatagccaattggcaggagccatgcattatatttgctcctcactgg
actctgcggctgggtcctattgttcatttacttcgacgttggtgtggagatcaaaactct
ttacttgttttacaggatggattggatgttgatatggctctcttgcctttcaagccaata
gcaatgaaggttttacattgttcattcctttctggtatgcggatgaggaaagctcagctg
ttactgaagatgttgcagccaaaaatagttgtgtttccagaggttttgaagcagcagatc
aatgtttcaaagtcgagttcacattcattttcaatcttgtactacaaagaaaacgaaaca
atagatatacgaagcttgaaagacaattcggttctagagattgcaacagggttggctact
cgattccgctggagaaagctggtacagaataatatggatgtgacgagactggaaggacag
ctattaatagacgagagcaaatattggttggtatctgggaacaaggtatcagacacctca
cagaatagaccactactgtattgtggtttacttgatatggggaagctcctcacgatattg
tcaaagatgggaattaatggatctatagaacaaggcatgaatgctgctgaatcagaaagt
gttgggatcataaaaattcatgatccaaacaaagccatgatagaagttaaagcaacaagt
actgttatcagcgcttctgatgagaacttagctgcgcgcatttttgaagctattactagt
cttttggatggcatttag
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