KEGG   Manihot esculenta (cassava): 110628301
Entry
110628301         CDS       T05761                                 
Name
(RefSeq) COMPASS-like H3K4 histone methylase component WDR5A
  KO
K14963  COMPASS component SWD3
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    110628301
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mesc03036]
    110628301
Chromosome and associated proteins [BR:mesc03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     110628301
    NSL complex
     110628301
   HMT complexes
    COMPASS/SET1 complex
     110628301
    COMPASS/SET1 complex (yeast)
     110628301
    MLL-HCF complex
     110628301
    MLL3/MLL4 complex
     110628301
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     110628301
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st EIF3I WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_SPT8 WD40_RFWD3 Beta-prop_NWD2_C eIF2A Beta-prop_DCAF12 Beta-prop_Nup120_160 WD40_like Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_Vps41 RMC1_N VPS8_N PROPPIN Beta-prop_VPS8 WD_LRWD1 DUF5888 Beta-prop_IFT80_2nd Beta-prop_LRRK2 Caudo_bapla_RBP
Other DBs
NCBI-GeneID: 110628301
NCBI-ProteinID: XP_021630600
LinkDB
Position
12:complement(32380576..32383184)
AA seq 320 aa
MSTTDPAESFKPYHLTQTLTGHKRALSAVKFSSDGRFLASSSADKTLRTYSLSPSNPPTS
PLTPLHEFQGHEQGVSDVAFSSDSRFLVSASDDKTIRLWDVTTGSQIKTLQGHTNYVFCV
NFNPQSNMIVSGSFDETVRIWDVKSGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLC
RIWDAGTGHCIKTLIDDENPPVSYVKFSPNGKFILVGTLDNTLRLWNFSTGKFLKTYTGH
TNSKFCISSTFSITNGKYIVSGSEDNCVYLWELQTRKVVQKLEGHTDTVISVACHPTQNM
IASGALGNDKSVRIWTQERE
NT seq 963 nt   +upstreamnt  +downstreamnt
atgtcgacaacagacccagccgaatccttcaaaccctaccatctaacccaaactctaacg
ggccacaagcgtgctctctcagccgtcaaattctcttccgacggccgctttctcgcttcc
tcctccgctgacaaaaccctcaggacctattccctttccccctccaatcctcctacttct
cctcttactcctctccatgaatttcaaggccacgagcaaggcgtctccgatgttgccttc
tcttccgactcccgtttccttgtctctgcttccgacgacaagaccattcgcctctgggac
gtcaccaccggctcccagatcaaaactctccaaggccatactaattatgtcttctgtgtc
aactttaatccgcaatccaacatgatcgtctcgggttcttttgatgagacggttaggatc
tgggatgtgaagagcggcaagtgtttgaaggtgcttccggcgcattctgatcctgttaca
gctgtggatttcaatagggatggttcgcttattgtttcgagtagttatgatgggttgtgt
aggatttgggatgctgggactggccattgtattaagactttgatagatgacgagaatccg
cctgtttcatatgtcaagttttcgcccaatggcaagtttattcttgttggcaccttggat
aacactttgaggctttggaatttctccacagggaaatttctgaagacatacactggacat
actaattcgaaattctgcatatcatccaccttttctataacaaatggaaagtacattgtc
agtggttctgaagataattgtgtatatttgtgggaacttcaaaccaggaaagtagttcaa
aaattggaaggtcatactgacactgttatatcagtagcatgccatcccactcagaacatg
attgcatctggtgctcttggcaatgacaagagtgtgaggatctggactcaggaaagggaa
tga

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