Manihot esculenta (cassava): 110628361
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Entry
110628361 CDS
T05761
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG2 isoform X1
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110628361
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110628361
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110628361
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
zf-C3HC4
Prok-RING_4
zf-C3HC4_2
zf-RING_2
TerY_C
Motif
Other DBs
NCBI-GeneID:
110628361
NCBI-ProteinID:
XP_043804918
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Position
12:complement(1780093..1785298)
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AA seq
464 aa
AA seq
DB search
MGGKSSKGSSGRHISSYGASNSSSSSWNQYGHPQASPYPYPSQQNQYYTPQQHQPSNSSY
SYEAESPRPQRRLDRKFSRIADDYKTLDQVTSALAHSGLESSNLIVGIDFTKSNEWTGSR
SFNRRSLHHIGNGQNPYEQAISIIGRTLSAFDEDNLIPCFGFGDASTHDQDVFSFHEDER
FCNGFEEVLTRYREIVPQLRLAGPTSFAPIIEMAMTIVEQSGGQYHVLLIIADGQVTRSV
DTQHGQLSPQEKKTIDAIVKASEYPLSIILVGVGDGPWDMMREFDDNIPARAFDNFQFVN
FTEIMSKNVNISRKETEFALSALMEIPAQYKATIELGILGSRRTGNAPERVPLPPPLHGP
SSFSKSVKPSSSSSFKPHIPSYSGYDSSVPSYSGYDSPVAGYDTPVNSASYTSSTYDNQV
CPICLTNRKDMAFGCGHQTCCECGEDLQSCPICRSPIQTRIRLY
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgggagggaagagttcaaaagggtcgagtgggaggcatatttcatcatacggtgcatcc
aattcatcatcctcatcatggaatcagtatggacacccacaagcatcaccatatccatac
ccatctcaacaaaaccaatactacacacctcagcaacatcagccctctaattcttcttat
agctatgaagcagaaagtcctcggccacagaggaggttagatagaaagttctccaggatt
gctgatgattacaagaccttggatcaggtcacttctgctcttgctcattccggcctggag
tcttctaatctcattgtcggcattgatttcacaaagagcaatgagtggacaggatcaaga
tcattcaatcgacgaagcttacatcacattggcaatggacaaaatccttatgaacaggca
atatcaattattggccggactttatctgcatttgatgaagataacttaattccatgtttt
ggatttggagatgcatccacacatgatcaagatgtcttcagtttccatgaagatgaaaga
ttctgcaatggttttgaggaagtgctgacacgatacagagaaattgttccgcaacttaga
cttgcaggaccaacatcttttgcacccatcattgagatggccatgactattgttgagcaa
agtggtggacagtaccatgttctgttgataattgctgacgggcaggtaacaaggagtgtt
gatacacagcatggtcaactcagtccgcaggagaaaaagacaattgatgcaattgtgaaa
gcaagcgaataccctttatcaataattttagtgggggttggtgatgggccttgggacatg
atgagagagtttgatgacaacatccctgctcgagcctttgataacttccagtttgtgaat
ttcacagaaataatgtcaaaaaatgtgaacatatccagaaaagagacggagtttgctcta
tcagcattgatggaaatacctgctcaatacaaagcgactattgagcttggcatattgggc
agtcgtaggacggggaatgctccagagagggttcctcttcccccacctcttcatggacca
tcttctttcagcaagagtgtaaaaccttccagctcaagcagctttaagccacatatacct
tcgtattctggatatgattcatcagtaccttcctactctggatatgactcaccagttgct
ggatatgatacgccagtaaactcagcttcatatacaagttctacttatgataatcaggtt
tgtcccatttgtcttactaatagaaaggacatggcctttggctgtgggcatcagacttgt
tgcgagtgtggagaagacctgcaatcatgccccatatgtcgaagcccaatacagactaga
atcaggctatattaa
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