Manihot esculenta (cassava): 110628448
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Entry
110628448 CDS
T05761
Name
(RefSeq) threonine--tRNA ligase, chloroplastic/mitochondrial 2
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
110628448
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mesc01007
]
110628448
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mesc03016
]
110628448
Enzymes [BR:
mesc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
110628448
Amino acid related enzymes [BR:
mesc01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
110628448
Transfer RNA biogenesis [BR:
mesc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
110628448
Prokaryotic type
110628448
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
RPA_interact_M
Motif
Other DBs
NCBI-GeneID:
110628448
NCBI-ProteinID:
XP_043805053
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All DBs
Position
12:6101475..6105973
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AA seq
668 aa
AA seq
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MEASPSLFLPKPTSLSNLKPPLPLCFPLKRFVSISKLQTQAQSRNFCALYGKRNGFSFST
AVATESATVSQNDTAQETQKEEKEKIVLPTNESSEKLLRIRHTCAHVMAMAVQKLFPEAK
VTIGPWIEYGFYYDFDMEPLADKDLKRIKKEMDRIIARNLPLVREEVSRDEAQRRIMAVK
EPYKMEILESIKEDPITIYHIGEEWWDLCAGPHVESTGLINKKAVELESVAGAYWRGDEN
RQMLQRIYGTAWENEEQLKAYLYFKEEAKRRDHRRLGQDLDLFSIQDEAGGGLVFWHPKG
AIVRHIIEDSWKKIHVEHGYDLLYTPHVAKVDLWKISGHLDFYRENMYDQMKIEDENYQL
RPMNCPYHILVYKRKLNSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCL
EDQIKDEIRGVLDLTEEILLQFGFSKYEVNLSTRPDKFVGDDDIWEKATSALKDALHDKG
WIYQIDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFNITYVDSNSEKRRPIM
IHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQVRVLPVTDTQLEYCKDLSNQLRRNGIRT
EVCHGERLPKLIRNAEKQKIPLMAVVGPKEVETQSVTIRSRFSGELGTLKVDEFLDKIKF
AIEKRTSL
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggaagcatctccttctcttttcctccctaagcccacttctcttagcaacctaaagcct
cctctgcccctttgctttcctctcaagcgtttcgtttcgatatctaagctccaaactcaa
gcccaatccaggaatttttgtgctttgtatgggaagagaaatggcttctctttctctact
gcagttgccactgagtcagcgactgtgtcccagaatgacactgctcaagagacccagaaa
gaggaaaaagagaaaattgttctacccactaatgaatcgtcagagaaactcctgagaatt
cgccacacgtgtgcgcatgttatggccatggctgttcaaaagctcttccctgaagcaaaa
gtgacgattgggccatggatagaatatgggttttattacgatttcgatatggagccgttg
gctgataaagacctcaagaggattaagaaggagatggatcgcattattgcccgaaattta
ccgcttgtaagagaagaagtatcccgagatgaagctcagagaagaataatggctgttaag
gaaccttacaagatggaaattttggaaagcataaaagaagatcccattactatctatcat
attggtgaagaatggtgggatctttgtgccgggcctcatgttgagtctactggccttatt
aataagaaagctgtggaacttgaatctgttgctggtgcttactggagaggagatgaaaac
agacaaatgttgcagaggatctatggaacagcttgggagaatgaagaacaactaaaagcc
tatctttacttcaaagaggaggctaaacgacgagaccataggcgccttggccaggatctt
gatctcttttctatacaggatgaagctggtggaggtttggtgttctggcacccaaagggt
gccattgttaggcacattatagaagactcctggaagaaaatacatgtagaacatggttat
gatttgctatatactcctcatgtggcaaaggtggatctctggaagatcagtggtcatctt
gacttctacagagagaacatgtatgatcaaatgaagattgaggatgagaattatcaactt
cggcctatgaattgcccttaccacattttggtgtacaaaagaaagctcaattcttatcgt
gattttccaatcagggttgcagagctaggaacagtatatagatatgagttatctggaagc
ttacatggtcttttccgtgtaagagggtttacccaggatgatgcacacattttttgtttg
gaagatcaaattaaagatgaaattaggggagtcctagatcttacagaggagatactactg
cagtttggtttcagcaagtatgaagtgaacctctcaactaggccagataaatttgtggga
gatgatgatatatgggaaaaagcaacatctgcccttaaagatgctttgcatgataagggg
tggatctatcaaatcgatgaaggtggtggtgccttttatggtccaaagattgatcttaag
attgaggatgctctgggaagaaagtggcagtgctcgacaatacaggtcgattttaacttg
cctcaacggttcaacattacttatgttgattcaaactcggagaagaggcgacctataatg
attcacagagcagtgcttgggtccttagagcggttttttggggttctcatagagcactac
gctggggattttccattgtggctctccccgattcaagttagagttttaccagttactgac
acacagcttgaatactgcaaagatctgagcaaccaactgagacgtaatggcattcgaacg
gaagtctgccatggcgagcgtttgccaaagctcattagaaatgcagagaagcagaaaatt
cctttgatggcggttgtgggacctaaggaagttgagactcaaagtgttacaataagatcc
aggtttagtggggagcttggaaccttgaaagtagatgaatttctagacaaaatcaagttt
gctattgaaaaaaggacttcgttatga
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