Manihot esculenta (cassava): 110628460
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Entry
110628460 CDS
T05761
Name
(RefSeq) ruvB-like 2
KO
K11338
RuvB-like protein 2 [EC:
5.6.2.3
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110628460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mesc03036
]
110628460
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mesc03037
]
110628460
Enzymes [BR:
mesc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
110628460
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
110628460
Chromatin remodeling factors
SRCAP complex
110628460
INO80 complex
110628460
INO80 complex (yeast)
110628460
SWR1 complex
110628460
ASTRA complex
110628460
Cilium and associated proteins [BR:
mesc03037
]
Motile cilia and associated proteins
Dynein assembly factors
110628460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
DnaB_C
RuvB_N
AAA_22
AAA_5
AAA_19
AAA_16
Mg_chelatase
ATPase
AAA_25
TsaE
Zeta_toxin
TiaS_TCKD
AAA_17
AAA_7
nSTAND3
Cdc6_lid
SLFN-g3_helicase
AAA_18
bpMoxR
Motif
Other DBs
NCBI-GeneID:
110628460
NCBI-ProteinID:
XP_021630806
LinkDB
All DBs
Position
12:complement(31782434..31786919)
Genome browser
AA seq
467 aa
AA seq
DB search
MAELKLSESRDLTRIERIGAHSHIRGLGLDSALEPRAVSEGMVGQTAARKAAGVILQMIK
DGKIAGRAVLLAGQPGTGKTAIAMGMAKSLGLETPFAMISGSEIFSLEMSKTEALMQAFR
KAIGVRIKEETELIEGEVVEVQIDRPAVAGAASKTGKLTLKTTEMETVYDLGAKMIEALG
KEKVQSGDVIAIDKASGKITKLGRSFSRSRDYDAMGPQVKFVQCPDGELQKRKEVVHCVT
LHEIDVINSRTQGFLALFTGDTGEIRAEVREQIDTKVAEWREEGKADIVPGVLFIDEVHM
LDIECFSFLNRALENEMAPILVVATNRGITAIRGTNYKSPHGIPIDLLDRLLIITTQPYT
KDEISKIVDIRCQEEEVEISEEAKALLTHIGVETSLRYAINLITAAALACHRRKGKLVES
EDVTRVYNLFLDVKRSTQYLMEYQNQYMFNEVPVGDGDEDDPSAMLS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggctgaactcaagctttctgaaagccgagacctgacccgaattgagcgcataggcgcc
cactcccacatccgaggacttggtcttgactccgcccttgaaccccgagcagtctcggag
ggcatggttggccagactgcagccagaaaggccgccggcgtcatcctacagatgataaag
gatgggaaaattgccggtcgagccgtacttctggcgggccaaccgggtactggaaaaacc
gcaattgcaatgggcatggcgaaatcgctcggcctcgagacgccatttgctatgatatct
ggcagcgaaatcttctcgctggagatgtctaaaacagaagccctaatgcaagcctttcga
aaagcaatcggtgtgagaattaaagaagaaaccgagttaatcgaaggcgaagtcgttgaa
gtccaaatcgataggccagctgtagctggtgcggcgtcgaagacagggaaattgacacta
aaaacgactgaaatggagacggtttatgatttgggggcgaagatgatagaagcgttgggg
aaggaaaaagttcaaagtggggatgtaattgcaatcgataaggcgtccggaaaaattaca
aagctcggtaggtcattttcacggtcgagggactacgatgctatggggccacaggtgaag
tttgttcaatgccccgatggtgagctgcagaagaggaaagaggtggtgcattgtgtgacg
cttcacgagattgatgtcatcaacagcagaacacaagggtttctggctctcttcactggt
gatactggtgaaatccgtgcagaagtgagagaacaaattgacacaaaggtggcagaatgg
agggaggaaggcaaggcagatattgtgccaggtgttctcttcattgatgaggtgcacatg
ctggatattgaatgtttctctttcctgaatcgtgctcttgagaatgaaatggctccaata
ttagttgttgcaaccaacagagggatcactgcaattcgaggcacaaattacaaatctcca
catgggattcccatagatctccttgatcggctactaattatcacaactcagccttataca
aaggacgaaattagcaagattgttgacattagatgccaagaagaagaagtggaaatatct
gaagaggcaaaggctttattaacgcatattggagtggaaacgtctttgcgatatgctatt
aatctcattactgctgctgcattggcatgccataggcgcaagggaaaacttgtagagagt
gaggacgtcactcgagtttacaatctgtttttagatgtgaagagatcaacacaatacttg
atggagtatcagaaccagtacatgtttaatgaagtaccagtaggggatggtgatgaagat
gatccgagtgccatgctttcatga
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