Manihot esculenta (cassava): 110628509
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Entry
110628509 CDS
T05761
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110628509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110628509
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
110628509
Prokaryotic type
Archaeal type
TFE
110628509
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_ribbon_8
Cas12f1-like_TNB
ADK_lid
wHTH-PRTase_assc
Zn_ribbon_SprT
Motif
Other DBs
NCBI-GeneID:
110628509
NCBI-ProteinID:
XP_021630894
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All DBs
Position
12:36576531..36583243
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AA seq
479 aa
AA seq
DB search
MSIEPFNRLVKLAARAFYDDVTTKGENQPKMGRSDNRGIAVVVLDALTRRQWVREEDLAK
DLKLHSKQLRRTLRFFEEEKLIARDNRKETAKGAKIYSAAVAATAEGQQGRKEGDEKIKL
HTHSYCCLDYAQIYDVVRYRLQRLRKKLKDELESRNTVQEYICPDCGRKYNALDALRLIS
PDDECFHCESCNGELVAESDKLAAQEVGDADDNAKRRRHEKLKDVLQKMEVQLKPLTDQL
SRVKDLAIPEFGTLQAWEARASAAGRAANDGSSSNDPSKSSQGYGGTAMPFFGQTKVEVA
FSGVECKEEDVKPETGSSGLKVLPPWMIKQGMNLTKEQRGEVKQEPKMDGSLAAESQFSD
DKKSINDNDDNKSLQDEYVKAYYAALLKKQEEIEAAKKQESTDASISNGISESLSNRQVG
MKFKREEDEPEDDVDWEEAPTGGSTSESYKVNDLNAEAEAEAEAEASGEDEEDIDWEEG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgaacctttcaatcggctggtgaagcttgccgctcgtgcgttttacgatgat
gtgacgacgaaaggggaaaatcaacccaagatggggaggagtgataacagagggattgcc
gtggtggtgcttgacgctcttacgagacggcagtgggtcagagaagaagatttagcgaaa
gatttaaaattgcactcgaagcaacttcgtcgaaccctgcgtttctttgaggaagaaaaa
ctaattgcacgagataataggaaagagacagcaaagggagcaaagatatatagtgctgcc
gtagctgccactgctgaaggtcaacagggtagaaaagaaggggatgagaagataaaacta
cacactcattcttactgttgtctagattatgcacagatatatgatgttgttaggtataga
ctgcagcgcctgaggaaaaagctaaaggatgaactggaaagcaggaacactgttcaagag
tacatatgccccgactgtgggagaaagtacaatgccttggatgcgctgcgattgatttct
ccagatgatgaatgcttccactgtgagagttgcaatggggaacttgttgcagagagtgat
aagttggcagctcaagaagtaggagatgcagatgacaatgcaaagaggcgtcgacatgaa
aaattaaaggacgtgcttcagaaaatggaggtgcaacttaagccattaacagatcaacta
agcagagtcaaggacttggctattcctgaatttggaacgcttcaagcatgggaagcccga
gcaagtgctgctgggcgtgcagcaaatgatggatctagttctaatgatccctccaaatct
tcccaggggtatggtggaacagcgatgccattttttggacaaacaaaggttgaagttgcg
ttttctggtgttgaatgtaaggaagaggatgtcaaacctgaaactggaagttcaggtctg
aaagttttgccaccgtggatgatcaagcagggaatgaatcttacaaaagaacaacgtgga
gaggtcaagcaggagcctaagatggatggcagtttagcagcagaatcacaattctcagat
gacaaaaagtccatcaatgataatgatgataataaaagtttacaggatgagtatgttaaa
gcttattatgctgctttgcttaagaagcaagaagaaattgaagctgctaagaagcaagag
tctacagatgcatccatctcaaatggtatttctgaatcactttccaatcgtcaagtgggc
atgaagttcaagcgtgaggaggatgaaccagaagatgatgttgattgggaagaggcacct
actggaggcagtacaagtgaaagctacaaggtgaatgacttgaatgcagaagcagaagca
gaagcagaagcagaagcttcaggagaggacgaggaggacatagattgggaagaaggctga
DBGET
integrated database retrieval system
