Manihot esculenta (cassava): 110628526
Help
Entry
110628526 CDS
T05761
Name
(RefSeq) AMSH-like ubiquitin thioesterase 2 isoform X1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110628526
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mesc01002
]
110628526
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110628526
04121 Ubiquitin system [BR:
mesc04121
]
110628526
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110628526
Peptidases and inhibitors [BR:
mesc01002
]
Metallo peptidases
Family M67
110628526
Membrane trafficking [BR:
mesc04131
]
Endosome - Lysosome transport
Others
Others
110628526
Ubiquitin system [BR:
mesc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
110628526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
110628526
NCBI-ProteinID:
XP_021630919
LinkDB
All DBs
Position
12:complement(2463109..2467011)
Genome browser
AA seq
287 aa
AA seq
DB search
MSFSFKAKNCGMAEERDQRLNFTNGDEAELASLYSLDSSLCLYTLEFPCQNLFQTDGKFQ
HISVHTVTQSSPSPILSCVEKPLKHAHVLPIPVANSDTSSYNQPAASNVLQDIHISARLM
DNFLELARENTEKDLETCGVLGAFLEKGTYYVTTLIIPKQKSTSNSCEALKEEEFFTIQN
EQSLVPVGWIHTHPSQSCFMSSIDLHTQYSYQVMVPEAFAIVMAPTDSSRSYGIFRLSDP
SGMNVLKECQETGFHPHSEPPNGSPIYEHCSNVYTNSNLRFEIFDLR
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttagttttaaggctaagaattgtgggatggcagaagaaagagatcaaagatta
aatttcaccaatggagatgaagctgaactagcatctttgtattcattggattctagcctc
tgtttgtacacacttgaatttccctgtcagaatctgtttcagacagacggcaaattccag
catatctctgttcatactgtcactcagtcttctccttctcccatactctcatgtgtggag
aagccacttaaacatgctcatgttttacctataccagttgctaattcagatacaagttca
tacaatcagccagcagcatctaacgtcctgcaagatatacatatttcagctcggttgatg
gacaattttcttgaacttgccagagaaaatacagagaaggatcttgagacctgtggggtt
ctgggtgctttccttgaaaagggaacttactatgttaccaccctgataatacccaaacaa
aaatcaacttccaattcttgtgaggctctaaaagaggaagaattttttaccatacagaat
gaacaatcacttgttcctgtgggatggattcatacacatccttctcaaagttgtttcatg
tcatcaatagatctacacactcaatactcgtatcaggtaatggtaccagaggcgtttgcc
attgtcatggctccaactgattcctcaaggagctatggaatattccggctatcagaccca
agtggaatgaatgtactgaaggagtgtcaggagacaggatttcatcctcacagcgaacct
ccgaatggaagccccatttatgagcattgctccaatgtatacacaaattcaaatctgagg
tttgaaatcttcgacttgcgctga
DBGET
integrated database retrieval system
