Manihot esculenta (cassava): 110628565
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Entry
110628565 CDS
T05761
Name
(RefSeq) LOW QUALITY PROTEIN: two-component response regulator ARR11-like
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110628565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110628565
Transcription factors [BR:
mesc03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
110628565
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
110628565
NCBI-ProteinID:
XP_043804859
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Position
12:complement(1598839..1603509)
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AA seq
583 aa
AA seq
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MMDNGFSSPRSDAFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCALARDALHLLRER
KDNYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKP
IRMKELRNIWQHVFRKKIHEVRDIEILEGMETMQMARNGLDVSDDGYLLCGEDLTSVRKR
KDFESKHDDKDPADNSSTKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLT
RENVASHLQKYRLYLSRLQREDTVSAGGIKHSDPPLRDSASSFGAQNSISMQQLDVASRS
YGFLGNSLLVQNGESRGHENERKGTVSKSAAEPKGALNVEVPDPRKSRSSQMEFGRSFTS
LGSEVNFAEFDSNFPTRFSWCESELKQEPQALHLDDGLRQLTLPGKQQRIQADYPQPAPP
IISGSSATERDIGSVKIKPLYDECRSNASQVSSIGSTIETSDVQNKTYPVNHQAFDPIST
STSSMKNQHFNLSCMSDLESTQKSVNSELSPYATLDDDFQVCWVQGDCYAMNLGLQNIEF
PEFCDPGLIAGVPTYLYDSVRFDYDNLYDPTEYSLIEQGLFIA
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgatggacaatggtttctcttcccctcgaagcgatgcgtttcctgctggtcttcgagtt
cttgttgtcgatgatgatcccacctggttgaaaatccttgaaaagatgctcaagaagtgt
tcttatgaagtgaccacatgtgctttagcaagagatgctttgcacttgcttcgtgagagg
aaagataactatgacatcgtgatcagtgatgtcaacatgcctgacatggatgggtttaaa
cttctagaacatgttggattggagatggatcttcctgtcattatgatgtctgttgatgga
gaaacaagtcgggttatgaaaggtgttcagcatggagcctgtgattatcttcttaaacca
atacgaatgaaagaacttcgaaatatatggcagcatgtattcagaaagaaaatccatgag
gtaagagacattgaaattcttgaaggaatggaaactatgcaaatggctagaaatgggtta
gatgtgtccgatgatggttacttgctttgcggagaagatctgacttcagttaggaaaaga
aaagattttgaaagcaaacatgatgacaaagatcctgcggacaattcttccacaaagaaa
gccagagtagtttggtcggtagatcttcatcagaaatttgtcaaagctgtaaatcagata
ggatttgataaagttggtccaaagaaaatccttgacttgatgaatgttccatggttgacg
agagaaaatgttgcaagccacttgcagaaataccgtctctatttgagtagattgcagagg
gaagatactgtctctgctggtggtataaagcattcagacccgcctttgagagattctgct
agtagttttggtgctcagaactcgatcagcatgcaacagcttgatgttgcaagtcgcagc
tatggatttctaggcaatagtttacttgtccaaaatggggagtctagaggccatgaaaat
gagcgaaagggaactgtttcaaagagtgctgcagaacccaaaggagctttaaatgttgaa
gttcctgatcctcgcaagtccaggagttcacaaatggaatttggtcgttcttttacttct
ctgggatcagaagtaaacttcgcagaatttgattcaaacttcccgacacggttttcgtgg
tgtgaaagtgaactgaagcaagaacctcaggcgctccatttagatgatgggcttagacag
ctaacactgcctggtaagcagcagcgcattcaagctgattatccacagccggctccacct
attatttctggatcttctgcaactgaaagagacataggctctgtcaaaataaagcctttg
tatgacgagtgcaggagcaatgctagccaagtaagttcaattgggagcacaattgagact
agcgatgttcaaaacaagacttatccagtgaatcatcaagcctttgatcccatttccact
agcacatcaagcatgaaaaaccagcacttcaatctgagttgcatgtcggacctggaatca
acccaaaagagtgtaaattcggaactgtcaccttatgcaacactggatgatgattttcaa
gtttgttgggttcaaggtgattgttatgctatgaatctgggactccaaaacatcgagttt
ccggagttctgtgaccccggtctcattgccggtgttccaacttacctgtacgattcagtg
aggtttgactacgataatctctatgacccaacagaatactctctaatcgagcaaggcttg
tttatagcctaa
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