Manihot esculenta (cassava): 110628570
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Entry
110628570 CDS
T05761
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP isoform X1
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04120
Ubiquitin mediated proteolysis
mesc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110628570
04120 Ubiquitin mediated proteolysis
110628570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
mesc03110
]
110628570
04131 Membrane trafficking [BR:
mesc04131
]
110628570
04121 Ubiquitin system [BR:
mesc04121
]
110628570
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110628570
Chaperones and folding catalysts [BR:
mesc03110
]
Other chaperones and cochaperones
Others
110628570
Membrane trafficking [BR:
mesc04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
110628570
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
U-box type E3
110628570
Multi subunit type E3
STUB1-CHIC2 complex
110628570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
TPR_1
TPR_2
TPR_11
TPR_8
TPR_17
TPR_16
TPR_14
ANAPC3
TPR_12
TPR_BSK1_C
zf-NOSIP
TPR_9
TPR_19
TPR_MalT
zf-Nse
Motif
Other DBs
NCBI-GeneID:
110628570
NCBI-ProteinID:
XP_021630998
LinkDB
All DBs
Position
12:complement(4839508..4844259)
Genome browser
AA seq
294 aa
AA seq
DB search
MGPGAVLTAAAKQAEQLRIDGNTYFRKDRFGAAIDAYTEAITLCPNVPIYWTNRALCHRK
RNDWTKVEEDCRKAIEIDHNSVKAHYMLGLALLQKNELAEGIKALQRALDLGRGADPKGY
MVEEIWQELAKAKYMEWEQASTKRSWELQSLKYVNPIVFVSHREACENALKEKHFLDNSQ
TEGFLDETIASHLKQLEALGQVFERAVEDDAPSEVPDYLCCKITLDIFRDPVITPSGVTY
ERAVILDHLKKVGKFDPITREPLDPSQLIPNLAIKEAVQAYLRKHGWAYKMDWI
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggggcctggagctgtattgactgcggctgcgaaacaagctgaacaattaagaatcgat
gggaacacctatttcagaaaggatcgatttggagctgcaattgatgcttatactgaggca
attactttgtgccctaatgttcctatttattggacgaatcgagctctgtgtcatcggaaa
cggaatgattggacaaaagttgaagaggattgtcgcaaagcgattgaaattgaccacaat
tctgtcaaggcccactatatgttgggacttgcattgctacagaagaatgagttagctgaa
ggaataaaggcattgcaaagggctctggatcttggtaggggtgcagacccaaagggttat
atggtagaagagatctggcaagagctagcaaaagcaaaatacatggaatgggagcaagca
tctactaagcgttcatgggaactgcaaagcttgaagtatgtaaatcccattgtctttgtt
tctcacagagaagcctgtgagaatgctctgaaggagaaacatttccttgataattctcag
acagaaggattcttggacgagacaattgcttcccatttgaaacaactggaggctttagga
caagtgtttgagagagctgtagaagatgacgcaccatcagaggtgccagattatctatgt
tgtaaaatcacgcttgatatattccgtgatcctgtgattactccaagcggggttacatat
gaaagagctgttatcctcgaccatctaaagaaggtgggcaagtttgatccaatcaccaga
gaaccacttgatccatcacagctaataccgaacttggctataaaggaagcagtccaagca
tatcttagaaaacatggttgggcttacaagatggactggatttga
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