Manihot esculenta (cassava): 110628583
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Entry
110628583 CDS
T05761
Name
(RefSeq) autophagy-related protein 13b
KO
K08331
autophagy-related protein 13
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
110628583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110628583
03029 Mitochondrial biogenesis [BR:
mesc03029
]
110628583
Membrane trafficking [BR:
mesc04131
]
Autophagy
Autophagosome formation proteins
ULK complex
110628583
Atg1 complex
110628583
Mitochondrial biogenesis [BR:
mesc03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
110628583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
UL16
Motif
Other DBs
NCBI-GeneID:
110628583
NCBI-ProteinID:
XP_043805021
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All DBs
Position
12:35908442..35913522
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AA seq
608 aa
AA seq
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MTSSHSNTHAEAAEMEQVITEFFAKSLHIILESRSPYMSSRNYSGEQAVSSPSSSSSSSS
GVRPRDKWFNLALRECPAALEIPDIWCQSILEPMVIDVILVQRPLDWNPVKRFPKKDFGG
NISSKARYPSSWNSDHEELGCETKTEKIIERWIVQYGSRRSRDNGSGSRRSGNTLAMMYK
KSILLLRSLYATVRLLPAYKIFRDLNSSGQLRSFTLTYRVSSFVEPFTRKEETEMHRFGF
TPVDTSSGRLCLSVVYRSAPLDVSLESSTPMSPQFIPDYVGSPLVDPLKRFPSLTMSHGS
PSSLQLSRQHSWSYDIYKASPPSISFSPSPPHSESQASISNPSSCRFPPMNLPPHPPETS
SVHKKNMNFDEYCPSPNFTPSSSPSPPIYIPGIHLSKALLRSESAPVSIPAAKLDSSPVS
LNKQNFPPSPSFKGTRSRYGNPRTDTSTGFVQTDASVEKDDFDDPDFPYPFFDVEYEDMT
YPRSRPESFDQRGLLCDPLEPGGLLPIKKSQDAAVGALVLMLKKARPLRQDFSNSVNLSQ
DSKSKMPSSNLQERSQISEAPAVQQASANIGSSGLIASKTTADALEELRGYKKMMKDLLL
SQDDKPNT
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgacatcatctcatagtaatacacatgctgaagcagccgaaatggaacaagttatcact
gaattttttgctaaaagtctccacataatactggagtccaggtctccttatatgtcatct
cgtaattacagtggtgaacaagctgtgtcgtctccctcttcatcttcatcctcctcttca
ggtgtaaggccaagagataaatggttcaatttagcccttagggaatgcccagctgctctt
gagattcctgatatctggtgccagagcattctggaaccaatggttattgatgtgatcttg
gtgcagagaccactagattggaaccccgtaaaacgttttccaaaaaaggattttggtggg
aatatctcctctaaagccaggtatccttctagttggaattctgatcatgaagaattagga
tgtgaaactaagactgaaaaaatcatagagaggtggatagtgcaatatgggagtaggagg
tcaagggataatggttcgggcagtagaagatcaggcaatactttggctatgatgtataag
aaatcaatattacttttgaggtctttgtatgcaactgttaggcttctacctgcttataag
attttccgtgacctcaattcatctggacagcttcgctcattcacccttacttatagggtt
tcttcttttgttgagcccttcactcgaaaggaagagactgaaatgcaccgatttggtttt
actccagtggatacttcctcgggtaggctttgcctttcagtggtttatcgttcagcacct
ttggatgttagcttggaatcatcaactccaatgtccccccaatttatccctgattatgtt
gggagccctttggtggacccactgaaaaggttcccctctcttacaatgtcacatggttcc
ccatcatccttgcaattgtcaagacaacatagttggagttatgacatctataaagcttct
ccaccttcaatttctttctcaccatctcctcctcattcagaatcacaggcttcaatttct
aatccaagttcttgtcgcttcccacctatgaatttgccccctcatccacctgaaacatct
tcagttcataagaagaacatgaattttgatgaatattgtccttcccctaattttacaccc
tcctcgtcgccatcaccaccaatctatattcctgggattcatctttctaaggcgctttta
aggtctgaaagtgcaccagttagcattcctgcagccaaacttgatagttcccctgtttcg
ttaaacaagcaaaattttcctccatctccttccttcaaagggaccagaagcagatatggc
aatcctaggactgataccagcactggttttgttcagactgatgcatcagttgagaaggat
gattttgatgatcctgacttcccttacccattttttgatgtggagtatgaggatatgaca
tatccacgtagcaggcccgagtcgtttgaccaaagaggtcttttgtgtgatccactcgag
cctggaggactgcttccgattaaaaagtcacaagatgctgctgttggcgctcttgtactt
atgctaaagaaagcacgacctctacgtcaagacttctccaactcggttaatttgtctcaa
gactctaagtccaaaatgcctagcagcaacctccaagagcgtagtcagatctctgaggca
cctgcagttcagcaggcttctgcaaatattggatcttcagggcttattgcatcgaagaca
acggccgatgcattggaagaacttcggggttataagaagatgatgaaagacttgttgctt
agccaagatgataagcccaacacgtaa
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