Manihot esculenta (cassava): 110628664
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Entry
110628664 CDS
T05761
Name
(RefSeq) RNA-directed DNA methylation 4 isoform X1
KO
K28237
RNA polymerase II nuclear localization protein
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110628664
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
110628664
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Iwr1
FAM76
Motif
Other DBs
NCBI-GeneID:
110628664
NCBI-ProteinID:
XP_021631145
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Position
12:5862922..5869438
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AA seq
367 aa
AA seq
DB search
MASVSGSTSSPPKCTSEKPVVVRVKRKSNQSRLDAFWLEINERPLKRPLLDFEKLSISCE
SVHGKVEELKTKKVFVQHVETVNSTEATIDILQSFVPNSTDAVEVIPKSKERKQIFRRDN
KQQQLLSKARKNQEILAQNARFEQIWRSRRGNKETSHDKELRDMCHFYDIVRVDVEERSN
ELQDEVMSLEDQRILSSYLPLLREFIPSAAAQIETDVRDYMSKQDDYVYDYYTIRDDMDI
GDEDSLSPFPLVQVEDEDFYDGLDDESEYESDDSNAEDHPRNDYPDEISEEEDEVEEESE
ASSGELEDADDTSSTSSEFEESRHGLSEDAVQYEDGIYDDEDAFDYEDDDNFDYDDNDGD
DDGNAWR
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgtcagcggaagcacttcatctcctcccaaatgcaccagtgaaaagcctgtg
gttgttagggttaagcgcaagtccaaccagtctcgactggatgccttctggctggaaatt
aatgagaggccattaaagcgcccgctgttggattttgagaagttgtccattagttgtgaa
tcagttcatggaaaagtagaggaattgaagactaagaaagtttttgtacaacatgttgag
acggttaacagcacggaggccactattgatatattacaatcatttgtgcctaattcgact
gatgcagttgaagtcattccaaaaagtaaagaacgaaaacagatcttcagaagggataat
aaacaacagcagcttttgtccaaggctagaaaaaatcaagagatattggctcaaaatgcc
cgttttgaacaaatttggaggagccgtagaggtaacaaagagacttcacatgataaagaa
ctacgtgacatgtgccatttctatgacattgttcgtgttgatgttgaggaaagatccaat
gagttgcaagacgaagttatgtctttggaggatcagaggattcttagtagctacctacca
ctacttagagagtttattccaagtgctgcagcacagattgaaactgatgtacgagattac
atgtccaagcaagatgattatgtatatgactattataccataagggatgacatggatata
ggtgatgaagattccttaagcccttttcctctggttcaggtagaggatgaagatttctat
gatgggttagatgatgaatcagaatacgagagtgatgattcaaatgctgaggaccatcca
agaaacgattatcctgatgaaatctccgaagaggaagacgaagttgaagaggagagcgaa
gcatcaagtggtgaattagaagatgctgatgatactagtagtacatcttcagaatttgag
gaatcgaggcatggcttgtctgaagatgcagtccaatatgaagatggaatttatgatgat
gaggacgcttttgactatgaggatgatgataactttgattatgatgacaacgacggtgat
gatgatggcaatgcttggagatga
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