Manihot esculenta (cassava): 110628710
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Entry
110628710 CDS
T05761
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00040
Pentose and glucuronate interconversions
mesc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110628710
Enzymes [BR:
mesc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110628710
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110628710
NCBI-ProteinID:
XP_021631196
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Position
12:1702312..1704302
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AA seq
406 aa
AA seq
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MKPMATPLSLLILLLLAVAPRFISSSPVQDPELVAEEVHRSINASRRNLGFLSCGTGNPI
DDCWRCDPNWERNRQRLADCAIGFGKHAIGGRDGQIYVVTDSGNDDPVNPKPGTLRHAVI
QEEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIH
DCKQGGNAYVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAI
TISNNYMTHHNKVMLLGHSDGYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY
SHWEMYAIGGSADPTINSQGNRFLAPNDRFNKEVTKHEDAPESEWRHWNWRSEGDLLMNG
AFFTPSGAGASSSYARASSLGARPSSLVSSITAGSGALFCKKGKRC
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaatggcaactccactctctcttttaatcctcttactactagcagtggccccc
agatttatctcttcttccccagttcaggatcctgaattagtagcagaagaagttcacagg
agcatcaatgcttccaggaggaacttggggtttctctcctgtggaactgggaatccgatc
gacgattgctggcggtgtgaccccaattgggagaggaaccggcagagattggctgattgt
gcaattgggtttggtaaacatgcaattggtggaagagatggtcagatatatgttgttaca
gattctggtaatgatgatcctgtgaatcccaagccaggaactttaagacatgctgttata
caagaagagcctctgtggataatttttgctcgtgacatggtgatcaagctaaaggaagag
cttataatgaactctttcaagaccattgatggaagaggagctagtgttcacattgctggt
ggtccatgtatcactatacaatatgtgaccaatattataatccatggcttaaatatacat
gactgtaagcaaggggggaatgcctatgtgagggactccccaagccattatgggtggaga
actatatcagacggtgatggggtatcaatctttggaggaagccatgtgtgggtagatcat
tgctctttatcgaattgcaatgatggattgattgatgccatccatggttccacagccatt
actatctctaacaattacatgacccatcataacaaagttatgcttttgggtcacagtgat
ggctatactcaggataagaacatgcaggtcacaattgctttcaaccattttggtgaaggg
cttgtgcagagaatgccaaggtgtagacatgggtatttccatgttgtgaacaatgactat
tcccactgggaaatgtatgcaattggtgggagtgctgatcctaccattaatagtcaagga
aacagattccttgctcctaatgatagatttaacaaagaggtgactaaacatgaggacgca
ccagaaagtgagtggaggcattggaattggagatctgaaggagatttgttgatgaatgga
gcattctttacgccatcaggggctggagcttcttctagttatgcaagagcatctagctta
ggtgcaagaccatcttctctagtgagctcaatcacagctggatcaggtgcccttttttgt
aaaaagggtaaacgttgttga
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