Manihot esculenta (cassava): 110628758
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Entry
110628758 CDS
T05761
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110628758
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110628758
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110628758
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-RING_10
zf-C3HC4_4
zf-rbx1
Zn_ribbon_6
zf-ANAPC11
zf-Nse
zf-RING_4
Prok-RING_4
Zn_ribbon_LapB
RING_XB3-XBAT31
Zn_ribbon_19
Sina_RING
Motif
Other DBs
NCBI-GeneID:
110628758
NCBI-ProteinID:
XP_021631249
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All DBs
Position
12:4219729..4222832
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AA seq
220 aa
AA seq
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MSTQAQGVRGPTLRGYRRRKAMLDLNLLPNESRDQEGTSTQDVQFGVPTSQQEQPVPPTT
IDVEALDDDVIESSPRAFAEAKSNAQRNNTQRTHGSTVVVDVDSGQTTRLNYNNHNKRRR
ILPNQTIISCEHYVNLESSSSSMRENVQPPPSPQPPKEPTFNCPICMGPFVEETSTKCGH
IFCKACIKAAIRVQGKCPTCRKKVAVKELIRVFLPATNCL
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgagcactcaggctcagggggtgaggggccctaccttaagggggtaccggaggaggaag
gcaatgcttgacttgaatttgcttccaaatgaaagcagggatcaggaaggaacttcaact
caggatgtgcaatttggagtgccaacaagccaacaagagcagcctgtaccacctactaca
attgatgttgaggctttggatgatgatgttattgaatcttcccccagagcttttgctgaa
gctaagagtaatgcccaacgaaacaatacccaaagaactcatggaagtactgttgtagtt
gatgtggattcagggcaaacaactaggttgaattataataaccataacaagcgcagaaga
attctaccaaaccaaacaattatcagttgtgagcattatgtaaatttggaaagcagtagc
agctccatgagagagaatgtacagccacccccctctcctcagcctccaaaggagccaacc
ttcaactgtcctatttgcatgggtccatttgttgaggagacatcaacaaaatgtgggcac
attttctgcaaggcttgcattaaggctgcaattagagtacagggaaaatgtcctacatgt
aggaaaaaggttgctgttaaagaacttattcgggtgttccttccagcaaccaactgcttg
tga
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