KEGG   Manihot esculenta (cassava): 110628758
Entry
110628758         CDS       T05761                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
mesc  Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mesc04121]
    110628758
Enzymes [BR:mesc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110628758
Ubiquitin system [BR:mesc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    110628758
SSDB
Motif
Pfam: zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 zf-RING_10 zf-C3HC4_4 zf-rbx1 Zn_ribbon_6 zf-ANAPC11 zf-Nse zf-RING_4 Prok-RING_4 Zn_ribbon_LapB RING_XB3-XBAT31 Zn_ribbon_19 Sina_RING
Other DBs
NCBI-GeneID: 110628758
NCBI-ProteinID: XP_021631249
LinkDB
Position
12:4219729..4222832
AA seq 220 aa
MSTQAQGVRGPTLRGYRRRKAMLDLNLLPNESRDQEGTSTQDVQFGVPTSQQEQPVPPTT
IDVEALDDDVIESSPRAFAEAKSNAQRNNTQRTHGSTVVVDVDSGQTTRLNYNNHNKRRR
ILPNQTIISCEHYVNLESSSSSMRENVQPPPSPQPPKEPTFNCPICMGPFVEETSTKCGH
IFCKACIKAAIRVQGKCPTCRKKVAVKELIRVFLPATNCL
NT seq 663 nt   +upstreamnt  +downstreamnt
atgagcactcaggctcagggggtgaggggccctaccttaagggggtaccggaggaggaag
gcaatgcttgacttgaatttgcttccaaatgaaagcagggatcaggaaggaacttcaact
caggatgtgcaatttggagtgccaacaagccaacaagagcagcctgtaccacctactaca
attgatgttgaggctttggatgatgatgttattgaatcttcccccagagcttttgctgaa
gctaagagtaatgcccaacgaaacaatacccaaagaactcatggaagtactgttgtagtt
gatgtggattcagggcaaacaactaggttgaattataataaccataacaagcgcagaaga
attctaccaaaccaaacaattatcagttgtgagcattatgtaaatttggaaagcagtagc
agctccatgagagagaatgtacagccacccccctctcctcagcctccaaaggagccaacc
ttcaactgtcctatttgcatgggtccatttgttgaggagacatcaacaaaatgtgggcac
attttctgcaaggcttgcattaaggctgcaattagagtacagggaaaatgtcctacatgt
aggaaaaaggttgctgttaaagaacttattcgggtgttccttccagcaaccaactgcttg
tga

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