KEGG   Manihot esculenta (cassava): 110628847
Entry
110628847         CDS       T05761                                 
Name
(RefSeq) coilin isoform X1
  KO
K13150  coilin
Organism
mesc  Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mesc03041]
    110628847
Spliceosome [BR:mesc03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    110628847
SSDB
Motif
Pfam: Tudor_Coilin Coilin_N
Other DBs
NCBI-GeneID: 110628847
NCBI-ProteinID: XP_021631356
LinkDB
Position
12:complement(1853917..1860000)
AA seq 624 aa
MESVRLRLVFGHILSKSHETEGLKRCWILLKPQLQTISDLSSYLLHVFDLQNDCPRGLIL
SMEGFALPPFESISILKDKDIIRVEKNGGISSELLMVGDKANSLEVLEIVETRPVAAGMN
LLAKEEFEKEAGGYRSEDEEDTPEQAEDAVEVGNAREVQKVSKKRKASKELKSSKRKKTK
STSGKKGAIVEDIGNNVCEEQNGTSGTAMDDERIENIKALPVGKRLSQPQQNGNGTASAT
PTSSGTKKLPSRSARRKKAKRQWLKEKLKAERKEQHQRQLLEKSDQRSFEKGNLGVSEVS
AEKGNQEVSEVVPARDNEKLQEDHQQLDHDSDVEDDVVPIVIRPGHIRFGPLRKVDADQA
AEQNQIPLETFQWNGTTSKKKGQKWGKEKVPSYKRNDYKNVNQECSRTQIYGARPISTHI
DFEKLEFYASLPKEGDVIAYRLIELSSSSWTPELSSYRAGKISRYDIETNRVWLVPVPEY
PMIPVKEIGDDSSAEPSETSSYARDGSLWIEFSSLVEVRLVTLGNLNSGKSIGVSVRGQY
TDTDTETGAKSNNGSEAHASDRENGEVNAWEEINQALNAKKEQLSEEDNWNKTPGSGRRP
WSYKAMRGSALGPTVALLRAQNEL
NT seq 1875 nt   +upstreamnt  +downstreamnt
atggagtcagtgaggctccgtttagtgtttggtcacattttaagcaaatcgcacgagact
gagggcctgaaacggtgttggattctcctaaaaccacaactccaaaccatttctgatctc
tcctcctatctcctccatgtcttcgacctccaaaacgactgccctcgcggtcttatactt
tctatggaagggtttgctttaccaccttttgaatcgatttctattttgaaagacaaggat
atcatccgagtggaaaagaatggtgggatatcttctgaattattgatggtaggtgataag
gctaattctttggaggtgttagagattgtggaaactcggcctgtagctgctggcatgaat
cttctggcaaaagaggaatttgagaaggaagctggaggctatcgaagtgaagatgaagag
gacacaccagaacaggcggaagacgcagtggaggtgggaaatgctcgagaagtccaaaag
gtttcgaagaagagaaaggcatcaaaggaacttaagagttcaaagaggaagaaaactaaa
tctactagtggtaaaaaaggagcaatcgtggaagatattggaaataatgtttgtgaggag
cagaatggaacttcgggcactgccatggatgatgaaagaattgagaatattaaagctcta
cccgttggaaagaggctctctcagcctcaacaaaatggcaatggaactgcaagtgcaacg
ccaacttctagtggaactaagaagttgcctagtagaagtgctcgacgtaagaaagccaag
aggcaatggttgaaggaaaaactgaaagctgaaaggaaggagcaacatcagaggcagtta
ctcgaaaaaagtgatcaacggtcatttgaaaagggtaacctgggagtctctgaagtgtct
gctgaaaaaggaaatcaagaagtttctgaagtagtacctgcaagagataatgaaaaactt
caggaagaccatcaacagctagatcacgatagtgatgtagaggatgatgttgttcccata
gtaataaggccaggacatatacgctttgggccgctaaggaaagtggatgctgatcaggct
gcagagcaaaatcaaattcctttggagacctttcagtggaatggaacaacaagcaagaag
aagggtcaaaaatggggtaaagaaaaagttccatcttacaaaaggaatgattacaaaaat
gtcaatcaagagtgttccaggactcaaatttatggagcgagacctatatccactcatatt
gactttgagaagcttgaattctatgctagcttacctaaggaaggtgatgtgattgcttac
cgattgatcgaattatcatcatcatcctggacccctgaactttcatcctatcgagctggg
aagatatcacgatatgacattgagaccaatagggtttggctggtaccagtcccagaatat
ccaatgattcctgtgaaggagattggtgacgattcatctgctgaaccatcagaaacatcc
tcttatgcaagagatggttcattatggatagagttttcatcgcttgtggaagttcgcctt
gtcaccctaggcaacttaaattcagggaaatcaattggagtctctgtcagaggtcaatat
actgatactgatactgaaacaggcgccaagtccaacaatggcagtgaagctcatgcttct
gaccgagaaaatggagaagtaaatgcgtgggaagaaattaatcaggctttgaatgcaaag
aaggaacagctatcagaggaggataactggaacaagaccccgggttcaggcaggaggcca
tggtcttataaagccatgagaggcagcgcactgggtccaacagtggctttgttaagagcg
caaaatgaactatga

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