Manihot esculenta (cassava): 110629085
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Entry
110629085 CDS
T05761
Name
(RefSeq) protein transport protein SEC16B homolog isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110629085
Membrane trafficking [BR:
mesc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
110629085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
110629085
NCBI-ProteinID:
XP_021631646
LinkDB
All DBs
Position
1:complement(28358390..28369135)
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AA seq
1430 aa
AA seq
DB search
MASNPPFHAMEDQTDEDFFDKLVDDDFGPTNSDSVQKFTEGSDSDEAKAFANLSIEDASA
EGGTEVKGENDSVHASTELSGVHAEESNTLDSSNSLRSNAIVESNNDGIESEVVPDPVLS
KTVESTNSGVKEVGWSSFYADSLPNGKHGFGSYSDFFNDLGDTSGDFPGKVDEAANLENT
DGGGLHNSISYGEYQDGTQHYGGSAEESVNGQDSNSSQYWENMYPGWKFDASTGQWYQVD
SFDATANVQDSSNVNAVNEWASDGKVELNYLQQTSPSVVGTMAETSTSKSVSTWNQVSQG
ISNGYPEHMVFDPQYPGWYYDTIAQEWRSLESYTSSVQSTTIQNHDQQKQNEFAFADSHS
QNTNDIYSGYQQADKYGSRGYNSQDKHGGWGETYGDYNQQGLNMWQPDTVAKADADSNFD
GNQQWHTSYGSNVSMNNHVELHESFNSLGTVPSYDKMTQGRVDANGFIGSQSFIPSGNLD
VQFNQGNVKQNEHMNISNGYYSSQKSVNYSENNQQFSYAPNTEHMNISNDYYSSQKSVNF
SENNQQFSYAPNIGISSAGRPPHALVTFGFGGKLIVMKDGNSSSLGSTSFGSQAPVGGSI
SVLNLMEVISGNTNNDPSVRGSTCNYFRALCQQSFPGPLVGGNVGSRELNKWIDERITNC
ESTIDMDYKKGEVMKLLLSLLKIACQHYGKLRSPFGSDASLKESDAPESEVAKLFAFAKQ
NGSQFSAYGAFCHCLQSLPSEGQIQATASEVQNLLVSGRKKEALQCAQAGQLWGPALVLA
SQLGDQFYVDTVKQMALRQLVAGSPLRTLCLLIAGQPADVFTSGATDGGPGAMPQQPIQF
EANGMLDDWEENLAVITANRTKDDELVIIHLGDCLWKERSEITGAHICYLVAETNFETYS
DSARLCLIGADHWKHPRTYASPEAIQRTELYEYAKVLGNSQYILLPFQPYKLIYANMLAE
VGKVSDSLKYCQAILKSLKTGRASEVETWKQLVLSLEERIRAHQQGGYTANLAPAKLVGK
LLNFFDSTAHRVVGGLPPPVPSTSQGNEHHHQQMVPRVSSSQSTMAMSSLMPSASMEPIS
EWAADGNRMTMHNRSVSEPDIGRTPRQVESSKEETSSSAQSKTSSGTSSRFSRFGFGSQL
LQKTVGLVLGPRSDRQAKLGEKNKFYYDEKLKRWVEEGAELPAEEAALPPPPTISAFQNG
MSDYNLKSAIKSEGSPTNGSPTFKTPTPAEHSSGIPPIPTNSNQFSARGRMGVRARYVDT
FNQGGGSSAKLFQSPSVPSVKPAVSANAKFFVPTPLPSSENSKETMADNVQESTGFAEDP
STSVDGSFQSPSSSSKMNMQRFPSMDNIARGGRAINGSGNASMSSLSRRPASWSGSFSES
YSPPKMVETKPLVEALEMPPPSSFMPGDPSMTHMPMNGSNIGDDLHEVEL
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaatcctccatttcatgcgatggaggatcagacggatgaggatttcttcgat
aaattagttgacgatgattttggacccaccaattccgattcggtccagaagtttacggag
ggaagtgattctgatgaggccaaagcattcgccaatctgagtattgaggatgcaagcgct
gaaggtggaactgaggtgaaaggtgagaatgattctgtgcatgccagtacagaattatcc
ggtgtgcatgcagaagaaagtaatacattggattcgtccaactcattgaggtcgaatgct
atagttgagtcaaataatgatgggattgagtcggaggttgtaccagatccagtattaagt
aaaactgtcgaatccacaaactcaggagttaaggaggtgggatggagttcattttatgct
gattctttgcctaatgggaaacatggatttgggtcgtattcagatttttttaatgatttg
ggggatacttctggggattttcctgggaaagttgatgaagccgctaatttagagaatacg
gatggtggcggattgcataattcaatcagttatggggaatatcaagatggcacacaacat
tatggaggatccgctgaagagagtgttaatgggcaggattccaatagcagtcagtattgg
gagaacatgtatcctgggtggaaatttgatgccagtactgggcagtggtatcaagtggat
agttttgatgcaacagcaaatgtccaagacagttctaatgttaacgcagtgaatgaatgg
gcatctgatggaaaagtggagctgaattatttgcagcagacttcaccatctgtggtggga
accatggccgagactagcacatccaagagtgtgtccacttggaatcaggtatcgcaaggg
attagtaatggttaccctgaacatatggtttttgacccacaatatcctggttggtattat
gacacaatagcgcaagagtggcggtccctggaaagctacacatcttctgttcaatcaaca
actattcaaaatcatgatcagcagaaacaaaatgaatttgcttttgctgattcacattct
caaaataccaacgatatttatagtggatatcagcaagctgacaagtatgggtcacgagga
tataatagccaagacaagcatggtggctggggtgagacttatggtgactataatcagcaa
ggtttgaatatgtggcaacctgatactgttgccaaggctgatgctgattctaattttgat
ggaaaccagcaatggcatacttcttatggttcaaatgtgtccatgaacaatcatgtggag
ctgcacgaatcttttaattctttgggaacagttccttcatatgacaaaatgactcagggt
cgtgtggatgctaatggatttattgggtcacaaagttttatacctagtgggaaccttgat
gtgcagtttaatcagggaaatgtaaagcagaatgaacacatgaacatttcaaatggttac
tatagcagtcagaaatcagttaattattctgagaacaaccagcagttttcttatgctccc
aacactgaacacatgaacatttcaaatgattactatagcagtcagaaatcagttaatttt
tctgagaacaaccagcagttttcttatgctcccaacattgggatatcatctgctgggcgt
cctcctcatgctttggttacatttggatttggtggaaagctcattgtaatgaaagatggt
aattcaagttctttggggagcacatcatttggaagtcaggcacctgttggaggctcaatc
tctgttctgaatttgatggaggttatatcgggaaataccaacaatgatccaagtgttcga
gggagcacatgtaattattttcgtgctctctgtcaacaatcatttccaggtccgctggtg
ggaggcaatgttggaagtagagagttgaataagtggattgatgagagaattactaattgt
gaatccaccattgacatggattataaaaaaggagaagtaatgaagttgcttctctctttg
cttaaaatagcttgtcaacattatggaaaacttcgatctccttttggcagtgatgcttct
ttgaaggagagtgatgctccagaatcagaagttgcaaaactttttgcatttgctaagcag
aatggctcgcaattcagtgcttatggtgctttctgccactgcttgcagagtttgccatct
gaaggtcaaattcaggcaactgcatctgaggtacaaaatcttctggtttctggtagaaaa
aaagaggctttacaatgtgcacaagcaggccagttgtggggacctgcacttgttcttgca
tcgcagcttggtgatcagttctatgttgatactgtgaagcaaatggcacttcgccagctg
gtagcaggatcacctttgcggacattatgtctgctaattgcagggcaaccagctgatgta
tttaccagtggtgccacagatggcggtcctggtgctatgcctcaacagcctatccagttt
gaggcaaatggcatgcttgacgattgggaagagaatttggctgtaataactgctaaccga
accaaggacgatgagcttgtaattatacatcttggagattgcctgtggaaggaaagaagt
gagattaccggtgcacacatctgctatttagtggcagaaaccaactttgaaacatattca
gacagtgcaaggctatgtcttattggagcagatcattggaagcatccgaggacctatgct
agtccagaagctattcagagaactgaattgtatgagtatgcaaaggtgcttggcaactcc
cagtatatcctgctaccattccagccatataagttgatatatgcaaatatgctggccgaa
gtgggcaaagtttcagattcattaaagtactgtcaggcaatattaaaatctctaaaaact
ggacgtgcttcagaagtagaaacatggaaacaattagtattatcccttgaggagaggatt
agagcccatcaacagggcggatacacagcaaatttggctccagcaaagttagtagggaaa
ttgctcaactttttcgatagtactgctcaccgtgttgttgggggtcttccaccacctgta
ccatcaacatcacaaggtaatgagcatcatcaccagcaaatggtgcctagggtatcatct
agtcagtcaacaatggccatgtcatcattaatgccttctgcttcaatggagcccataagt
gaatgggcagctgatggcaatagaatgacaatgcataatagaagtgtttctgagccagat
attggtagaactccaagacaggttgagtcgtcaaaggaagaaacctcatctagtgcacaa
agcaaaacatcttcaggaacttcatcccgctttagtcgttttggttttggttcacagctt
ttgcaaaagactgtagggctagtcttagggccccgttcagatcgacaggctaaattggga
gaaaagaacaaattctattatgatgaaaagcttaagagatgggtagaagaaggtgctgaa
ctaccagctgaagaagcagccctgccaccccctccaacaatttcagccttccagaacgga
atgtctgattacaacttgaaatctgcaataaagagtgaagggtctcccactaatgggagc
ccaacatttaagactccaactcctgcagagcactcttcagggattccacctattccaacc
aattcaaatcagttctcagctcgtggacggatgggtgtacgagcaaggtatgttgacact
tttaaccaaggaggtggaagctcagcaaagttattccagtcaccttccgtgccatctgtc
aaacctgctgtttctgcaaatgcaaagttttttgttcccacacctcttccatcaagtgaa
aattcaaaagaaactatggcagacaatgttcaagaaagcacaggatttgctgaagaccct
tcgacatctgttgatggctctttccaatctccctcatcttcttcaaaaatgaacatgcaa
aggttcccaagcatggataatattgcaagaggggggagagcaataaatggcagtggcaat
gcctccatgtcatctctctctcgacgaccggcttcatggagtgggagcttcagcgaatcg
tatagccccccaaaaatggtggaaactaaacctttagtagaggcactggaaatgcctcca
ccatcatctttcatgcctggtgatccttctatgacgcatatgccaatgaatggtagcaat
attggagatgaccttcatgaggtggaactttag
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