Manihot esculenta (cassava): 110629114
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Entry
110629114 CDS
T05761
Name
(RefSeq) E3 ubiquitin-protein ligase ATL31
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110629114
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110629114
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
110629114
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
Prok-RING_1
zf-Nse
FANCL_C
Tmpp129
Prok-RING_4
Rtf2
PHD_NSD
Rad50_zn_hook
RINGv
zinc_ribbon_16
PHD
zf-HC5HC2H
zf-RING-like
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
110629114
NCBI-ProteinID:
XP_021631712
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Position
13:28907148..28908867
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AA seq
376 aa
AA seq
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MRGITLNLSRLIIHHGIIWFHVLLLCSASEHNTTTGKQEDRYVLYSNFDPTMAIVIVVLI
CAFFFVGMFSIFIRQCSENTVVVSNLANATVSGSRSRRAGLDPAVIEKFPVFVYSEVKNI
KIGRETLECAVCLSEFEDDETLRLLPKCNHVFHPECIDEWLASHVTCPVCRAKLTPESAE
IPKNSPQQTTTTESNQHDSVPTVTEEVAVTVNEEENRDSHPQVIVTPTTSQAKNRPPRLG
FSEKFPRSHSTGHSLVQAGENIERYTLRFPEEMRTQIMASAKLKRAVSFNVILATEGSSR
KGYRSSGEGSSRGKQIGRWAFLISGGNSFKSSKIENDGDSFNGSRNMLASVKNPLNCLNV
RVDGAEEPSTRVRPMV
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaatcacacttaatctcagccgtttgatcatccaccatggaatcatatggttc
cacgttctcctgctgtgctccgccagtgaacataacaccaccactggaaaacaagaggac
cgctacgtgttgtactcaaattttgatccgacgatggccatagtgatcgtcgttctcatt
tgcgctttcttcttcgtcggaatgttctccatcttcattcgtcagtgttctgagaacact
gttgttgtttctaacctcgccaacgctactgtctccgggagtagatcacggcgggctggc
cttgatcctgccgtgattgagaagtttccggttttcgtttactctgaggtgaaaaatatt
aaaattggtagagaaacactggaatgtgcagtttgcttgagtgaattcgaagacgatgaa
acgctgcgtttattgcctaaatgtaatcacgtttttcatcctgaatgtattgatgaatgg
ttggcttctcatgtcacttgcccggtttgccgagccaagctcacgccggaatccgctgaa
attccgaaaaactcaccgcaacaaacaacaacaacagagtcgaatcaacacgactctgtt
cctactgtgaccgaagaagtggcggttaccgtgaatgaagaggagaacagagattcacac
ccacaggttattgttactccaaccacgagtcaggcaaagaatcggccaccgagattagga
ttttcggagaagtttccaagatcgcattcgacggggcattcacttgttcaagcaggagag
aacattgaaaggtatacactgagattcccagaggagatgaggacgcagataatggcaagc
gcgaaactgaaacgtgcggtgagtttcaatgtgatattagcaacggaaggtagttcaaga
aaaggatataggagcagtggagaaggtagtagcagaggaaagcaaatcggccggtgggca
ttcttgatttccggaggtaattccttcaaatcaagtaagattgaaaacgatggagattcg
tttaacggtagtagaaacatgttggcatcagttaagaatccgttaaattgcttaaatgtg
agggttgatggagccgaagaaccgtccactcgggttcggcctatggtttga
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integrated database retrieval system
