Manihot esculenta (cassava): 110629185
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Entry
110629185 CDS
T05761
Name
(RefSeq) DNA mismatch repair protein MSH4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mesc03036
]
110629185
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Meiosis-specific proteins
Others
110629185
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
AAA_27
Motif
Other DBs
NCBI-GeneID:
110629185
NCBI-ProteinID:
XP_021631791
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Position
1:28489774..28504989
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AA seq
814 aa
AA seq
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MEDDGGERSSIVIGLIENRAKEVGMAAFDLRSASLHLSQYIETSSSYQNTKTLLQFYDPM
VIIVPPNKLAPDGMVGVSELVDRFYALVKKVVMARGCFDDTKGAVLIKNIAAKKPSALGL
DTYYKQYYLCLAAAAATIKCFDDVMLMLLFDKQVWPYFTHERTEAEKGVIVTNHSLLVTF
NGSFDHMNIDATSVQNLEIIETLHSSLWGTTNKKRSLFHMLKTTKTIGGTRLLRANLLQP
LKDVETINTRLDCLDELMSNEQLFFGLSQVLRKFPKDTDRILCHFCFKPKKVTNEVLGTD
NARRSRVLISSIILLKTALEALPLLSKVLKDAKSFLLANIYKTVCENEKYASIRKRIGEV
IDEDVLHARVPFVAQTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEFKLPNL
KLPFNNRQGFYFSIPLKDIQGKLPNKFIQVLKHGNNVHCSTLELASLNVRNKSAAEECYI
RTEVCLEALLDAIREDVSLLVLLAEVLCLLDMLVNSFAHTISTKLVDRYTRPEFTNSGPL
AIDAGRHPVLESIRNDFVPNNLFISEASNMVIVMGPNMSGKSTYLQQVCLIVILAQIGCY
VPARFSTIRVVDRIFTRMGSMDNLESNSSTFMTEMKETAFVMQNVSQRSLIIMDELGRAT
SSSDGFAIAWSCCENLLSLKAYTIFATHMENLSELATIYPNVKLLHLDVAIKNNRLDFKF
QLKDGPRHIPHYGLLLAEVAGLPSSVIETARSITAKIKEKEIKQMELNCHQYHQLQILYR
VAQRLICLKYSSQDEDSIRQALQNLKENYMNGML
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgatggaggagagagatcaagcatcgtgatcggtctgatagaaaatagagcc
aaagaggtcggcatggctgcttttgacttaaggtcagcttcattgcatctttctcagtat
atcgaaactagtagctcctaccagaatacaaaaactttgctgcaattctatgatcctatg
gtaatcatagttcctccaaacaaactggcacctgatgggatggttggagtttctgagctg
gtggatcgattttatgctttagttaagaaggttgtgatggcccgtggttgctttgatgac
accaagggtgctgtactgattaaaaatatagcagccaagaaaccttcagcacttggtttg
gatacttattacaagcaatattatctctgcctggccgctgcagcagccacaataaaatgc
tttgatgatgtaatgctgatgttgctctttgataaacaagtctggccttacttcacccat
gaacggacagaagctgagaaaggggtcatcgttacaaaccattccttgttggtaactttc
aatggatcatttgaccacatgaatattgatgcgactagcgttcagaatctggaaatcatt
gagacgcttcattcttccctttggggcacaacaaacaagaaaagaagtctattccatatg
cttaagacaacaaaaaccataggagggactagacttctacgggccaatctgttgcagcct
ttaaaagatgtggaaactatcaatactcgtctggattgcctggatgaactgatgagcaat
gaacagctattctttggactctctcaggttctgcgtaagtttccaaaagacactgataga
attctttgtcatttctgctttaagccaaagaaagttacaaatgaggtcttaggtactgat
aatgctagaaggagccgggttttgatatcaagtattattcttcttaaaactgctttggaa
gccttgcctttactttcaaaggtgcttaaagatgcaaaaagttttcttcttgcaaatatt
tacaagactgtatgtgaaaatgagaaatatgcttccatcagaaagagaattggggaggtg
atagatgaagatgtgctacatgcgcgtgttcctttcgttgcccaaacacagcagtgtttt
gctgtcaaggctggaatcgatggactattagatattgctcggagaacattttgtgatact
agtgaagcaatacataatcttgcaaacaaataccgtgaagaattcaagctaccaaatttg
aaacttccatttaataatagacagggcttttactttagcattccattgaaggacatccag
ggaaagcttccaaacaagttcattcaggtcctgaaacatggaaacaatgtacactgctcc
actttggaacttgcttctctaaatgtcagaaataagtctgctgctgaagagtgctatata
agaacagaagtttgcctagaagctctattagatgctataagagaggatgtctccttgctc
gttctgcttgcagaggttctatgccttctagatatgcttgttaattcatttgctcataca
atatcaactaagctcgttgaccgatatactagaccagaattcacaaatagtggtccattg
gcaattgatgctggaagacatcctgtcctggagagcattcgcaatgactttgttcccaac
aatctctttatttcagaagcgtcaaacatggtcattgtcatgggcccaaacatgagtgga
aagagcacttatcttcaacaagtttgtcttattgttattctggctcagataggctgttat
gttcctgctcgcttctcaaccataagggtagttgatcgtatatttacaaggatgggttca
atggataatcttgaatcaaattctagtacgtttatgactgagatgaaagagacggctttt
gtcatgcagaatgtctcccaaagaagcctgatcattatggatgagcttgggagagctact
tcttcttcagatggatttgctattgcctggagctgctgtgagaatctgttatcactcaaa
gcgtataccatatttgctactcatatggagaatctatcagagctagcaaccatctatccg
aatgtcaagcttcttcacttggatgttgccattaaaaacaaccgcttagatttcaagttt
caactcaaggatggaccgagacacatacctcattatggccttctactggcagaagtggca
ggcttaccaagttcagtgattgaaacggctagaagcatcactgcaaagatcaaggaaaag
gaaataaaacaaatggaactaaactgccatcagtaccatcaactgcagatactatatcgt
gttgctcaacgactaatatgcttaaagtattccagccaagacgaagattctattcggcaa
gcactacagaatctcaaagagaactacatgaatggaatgctttga
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