Manihot esculenta (cassava): 110629266
Help
Entry
110629266 CDS
T05761
Name
(RefSeq) probable rhamnogalacturonate lyase C
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
110629266
Enzymes [BR:
mesc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
110629266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
BsuPI
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
110629266
NCBI-ProteinID:
XP_021631869
LinkDB
All DBs
Position
13:complement(30082966..30123716)
Genome browser
AA seq
814 aa
AA seq
DB search
MPTPEDREKGQPLAYPEAVLLIHSSKPQLTGEVDDKYQYSMEHKDSISDCSAAEFFIPDP
MPNLINKLLVGKPSHTFRQYRLWDRYTDLFPTNDLVHNVATDNYSKDRFFAHVPRRTNNM
NQPTTWQIIFELKNVIQNGNYTLQAALAAANRADLQLPEENEKLFSMSVLGDIWMHMASK
YHASEFLFSINITEVVIDNGIVEVTLSKPKGFVTGVKYKGINNVLDIQDSEDNRGYWDVV
WYKPGRVDIFDRMEGTNYTVIMADENQVEVSFTRRWDVSIDSNIVPLNIDKRFIMRRGSS
GFYAYAILERLEGWPDVNMDQIRIVFKLQTNKFNYMAISDKKQRIMPTLEDRARGQPLAY
PEAVLLTHPSNPQLTGEVDDKYEYSMEHKESKLYGWISDDKSVGFWMIRPSDEFCNGGPI
KQDLTSHAGPIVLSMFTSTHYGGKDINTQYRKEEQWKKVFGPVFIYLNSNRANGAYKTLW
KDAKRQMSIEVESWPYDFPQSKDFPHSNNRATVEGQLIIHDEGVSKLASSAHVGLAAPGD
AGSWQFESKGYQFWTRANKKGFFSIKNVRAGIYNLYAWVPGFIGNYMYKWRISIKQGSKI
ILGVLKYIPPRNGPTLWEIGIPNRSATEFFIPDPKPTLENKLFINKPHDKFRQYGLWDRY
SNLFPSNDLIYHVGKGNYTQDWFFAHVPRRKNNIMLQPTTWRIIFELKNVVQKGNYTLQI
ALASANIADIQVRVNNPRATRPVFLTGQIGRDDAIARHGIHGLYWLFTINVPSSFLFNGP
NTIYLTQSKAYSPFCGVMYDYIRFEGPPKIKIVN
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgcccacacctgaagatcgtgaaaaaggccaacctctagcatacccagaagctgttctc
ttgatccattctagcaagcctcagcttactggagaggtggatgacaagtaccaatactcc
atggaacacaaagacagcatttcagattgctctgctgctgaatttttcattcctgaccct
atgcctaatctcataaataaattattagttggtaaaccaagtcatacgtttagacaatat
agattatgggatcgatacactgatttatttcctaccaatgatctcgttcacaatgtggcc
acagacaattatagtaaagaccggttctttgctcacgttcctaggcgtacaaacaatatg
aatcaaccaaccacgtggcagattatttttgagctaaaaaatgtgattcaaaatggaaat
tatacgctccaagcagccctagcagctgccaatagagcagatttgcagcttccagaagaa
aatgaaaaactattctccatgtctgtacttggggatatttggatgcatatggcttccaaa
tatcatgcaagtgagtttttgttctcgattaacatcacagaggtggtgatcgataatggc
attgtcgaagttactctatcaaaaccgaagggttttgtgacaggagtaaaatataaagga
attaataatgtacttgatatccaagattcagaagataatcgagggtactgggatgttgtc
tggtacaagccaggaagggttgacatctttgacaggatggaaggaacaaattacacagtt
ataatggcagacgaaaaccaagtggaagtttcattcaccagaagatgggatgtttctatt
gatagtaacatagttcctctcaacatagacaaaaggttcataatgcggcgtggaagctca
ggattttatgcctatgctatattagaacgtttagaaggatggcctgatgtgaatatggat
caaattcggattgttttcaaacttcaaactaacaagtttaactacatggcgatatcggat
aagaaacaaaggatcatgccaacacttgaagaccgtgcaagaggccaacctctagcatac
cctgaagctgttctcctaactcatcccagcaaccctcagcttactggagaggtggatgac
aagtacgaatactctatggaacacaaagagagtaagttatatgggtggatatcagatgat
aaatcagtagggttttggatgatcagaccaagtgatgagttctgtaatggtggaccaatc
aaacaagacttgacttctcatgctggtcctattgttctatctatgtttacaagcactcat
tatggtgggaaggatatcaatacacaatatcgaaaagaagagcaatggaaaaaggttttt
gggcctgtctttatttatctcaactctaatagggctaatggagcttataaaacactttgg
aaagatgctaaaagacagatgtcaatagaagtggaaagttggccgtacgatttccctcaa
tcgaaagattttcctcattcaaataatcgagcaactgttgaaggccaattgatcatacac
gatgaaggtgtctcaaaattggcaagttctgcacatgtaggcttagcagccccaggagat
gcaggctcttggcaatttgaatccaagggttatcagttttggacaagagccaataagaag
ggattcttttcaattaaaaatgtcagagctggaatttataatttatatgcatgggttcct
ggttttattggaaattatatgtacaaatggagaatttccattaaacaaggaagcaagata
atactaggtgtccttaagtatattcctccaagaaatggtcctacgctttgggaaataggc
attcctaatcggtctgctaccgaattttttatacctgatcctaagcctacactcgaaaat
aaattattcattaataaaccgcatgataagtttaggcaatatggattatgggatcggtac
agtaatttatttccttcgaatgatctcatataccatgtaggcaaaggcaattatactcaa
gattggttctttgctcatgtccccaggcgtaaaaacaatatcatgcttcaaccaaccaca
tggcgaattatttttgagctgaaaaatgttgtccaaaagggaaattatacactccaaata
gccttagcatccgccaatatagctgatatacaggtgagggtcaacaatccaagagccaca
agaccagtattcttgacagggcaaatagggagggatgatgcaattgcaagacatggaatt
catggactatattggttatttaccattaacgttcctagttcttttctttttaatggaccc
aacacaatttatcttactcagtccaaagcttactctcctttttgtggtgtaatgtatgat
tatattcgctttgaaggaccaccaaaaattaaaattgttaattga
DBGET
integrated database retrieval system
