Manihot esculenta (cassava): 110629374
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Entry
110629374 CDS
T05761
Name
(RefSeq) adenine DNA glycosylase isoform X1
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
110629374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mesc03400
]
110629374
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
110629374
DNA repair and recombination proteins [BR:
mesc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
110629374
Prokaryotic type
110629374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
Whib
Motif
Other DBs
NCBI-GeneID:
110629374
NCBI-ProteinID:
XP_021632002
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Position
13:6693826..6700922
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AA seq
465 aa
AA seq
DB search
MEDLKEPKGKRAAQPRKKRKLISKDDEGISDIEDIFSDQETHKIRESLLEWYDHNQRDLP
WRTKETNPLQAEDEDKEKRAYGVWVSEVMLQQTRVQTVIDYYNRWVLKWPTLQHLALASL
EEVNEMWAGLGYYRRARFLLEGAKLITSKGDGFPNTVSSLRKVPGIGDYTAGAIASIAFK
EVVPVVDGNVIRVLARLKAISANPKDSITVKNFWKLAAQLVDPCRPGDFNQSLMELGATV
CTPSNPSCTQCPVLSHCRALSISNQDKSVLVTDYPTKVVKVKQRHEFSAVCVVEILGTEG
LIEGDQSDGGFLLVKRPENGLLAGLWEFPTVNLGKAADLTTRRKEIDHFLKQVFRLDPQR
TCSMVQREDIGEFVHIFTHIRLKVYVELLVMHLKGGMSELLSKNKKGATTWKYVDKQALS
NLGLTSGVKKVYTMVEKFKLSKSSTDSAPAKRRKKFEETKSASIN
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggaggacttgaaagaacccaaggggaagagagctgctcaaccaaggaagaagagaaaa
ttgatcagcaaagatgatgaaggaatttccgacattgaagacattttcagcgaccaagaa
acccataaaattagggaatcattactcgagtggtatgaccacaaccagagagaccttcct
tggaggacaaaagaaacaaacccacttcaagctgaagatgaagataaagaaaaaagagca
tatggggtctgggtatctgaagttatgctgcaacagactagagttcagactgtgattgat
tactacaaccgttgggtgctgaaatggcccactcttcagcatctggccctcgcttctctt
gaagaggtgaatgagatgtgggcaggtttagggtattataggcgggcacgtttcctgtta
gagggagctaaactgattacttccaagggggatggatttcctaatacagtgtcttcctta
cggaaggttccaggaataggagactatacagctggtgcaattgcctctatagcattcaaa
gaagtggtgcctgtggtggatgggaatgttataagggtgcttgctaggttaaaggcaatt
tctgcaaatccaaaagactcgataactgtcaagaacttttggaaactagcagctcaacta
gttgatccttgccgtcctggagatttcaatcagtcactgatggaacttggtgcaactgtt
tgcactccatcaaacccaagctgcacccaatgtcctgttttgagtcactgtcgtgccctt
tcaatttcaaaccaggataagtcagtattggttacagattatcctaccaaggttgttaag
gtgaaacaaagacacgagttttctgctgtttgtgttgtggagatattaggaactgaaggt
ctaattgagggtgatcaatctgatggtggatttcttcttgtgaagaggccagaaaatggt
ctgcttgctggtctttgggaatttcccaccgtcaatctgggcaaagcagctgatttaacc
acaaggagaaaagaaattgatcacttcctgaaacaagtcttcagactggacccacaaagg
acatgtagcatggtgcaaagggaagacattggagaatttgtccatattttcactcacatc
cgtctcaaggtttatgtggagttgctcgtaatgcatcttaaaggtgggatgagtgagttg
cttagtaagaacaaaaaaggagctacaacctggaaatatgttgacaagcaggctctttcg
aacttaggattgacatctggagtaaagaaggtctacactatggttgagaagtttaaactg
agcaaatcatctacagattctgccccagcaaaaagaaggaagaaatttgaggaaactaag
tctgctagtataaattag
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