Manihot esculenta (cassava): 110629391
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Entry
110629391 CDS
T05761
Name
(RefSeq) protein argonaute 16 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110629391
03036 Chromosome and associated proteins [BR:
mesc03036
]
110629391
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
110629391
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
110629391
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
110629391
microRNA pathway
RISC loading complex
110629391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
DUF3910
Motif
Other DBs
NCBI-GeneID:
110629391
NCBI-ProteinID:
XP_021632034
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All DBs
Position
13:complement(8170407..8180914)
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AA seq
889 aa
AA seq
DB search
MEKEAGGSPPLPMPANVKAELAVPRHSIINRRGFGSSGRRIPLLANHFRVSVSVPDAVFY
QYSVSITSEDKKAVEGKGIGRKLVDRLCQTYSSELAGKRFAYDGEKSLYTVGPLPQNKFE
FTVVLEESFAKRENGSPAATAKRSKRAFHSKTFKVEISYAAKIPLKSIVLALKGVEADNS
TQDALRVLDIILRQQAANRGCLLVRQSFFHDDMRNFTDVGGGATGVRGFHSSFRTTQGGL
SLNMDVSTTMVLTPGPVIDFLIANQNVREPRYIDWVKAKKMLKNLRVKPRHRNMEYKIIG
LSEKPCNQQYFPMRMKNGDNANGEPQIVEITVYDYFTRHCGIELTFSAYLPCLDVGKPKR
PNYLPIELCSLVSLQRYTKSLSSTQRASLVEKSRQKPLDRMRTVTDALKNYRYDDDTVLS
ACGVSIEKQLMQVDGRVLETPKLKVGNSEDCFPRNGRWNFNNKTLWKTHSIERWAVVNFS
ARCDTSQISRDLIGCGRRKGIQIERPYTLIEEDPQSRRGSPVSRVEKMFEQMIPKLPWEP
KFILCVLPERKNSDIYGPWKKKCLSDFGIVTQCISPFKVNDQYLTNVLLKINSKLGGINS
LLAIEDSRHIPLIKDTPTMILGMDVSHGSPGRSDIPSIAAVVGSLYWPLISRYRASVRSQ
SPKVEMIDALFKPSANGSDDGIMRELLVEFFCTSNGRKPKQIIVFRDGVSESQFNQVLNI
EVEQMIKAYQHLGEVDVPKFTVIVAQKNHHTKLFQASGPENVPPGTVVDTKIVHPRNYDF
YMCAHAGMIGTSRPAHYHVLLDEIGFSPDDLQSLIHSLSYVYQRSTTAISIVAPVCYAHL
AAQQMGQFMKFEDLSETSSGQGSMTSAGPVPVPELPRLHKNVACSMFFC
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagaagctggtggatcccctccacttccaatgccagccaatgtgaaggcagag
ctggcagttcctagacattcgatcattaacagacgtggatttgggtctagtgggcgtcgc
atacctttgcttgccaaccactttagagtttctgtcagtgttccagatgctgtattttac
caatatagtgtttccattacttcagaagataagaaagctgttgaaggtaagggaattggg
cgaaagctagttgataggctatgccaaacatactcatctgaacttgctggtaaaaggttt
gcttatgatggtgagaaaagcctctatacagtggggcctctgccacagaacaaatttgag
ttcactgtggtacttgaggaatcatttgccaaacgtgaaaatggaagccctgctgcaact
gctaagaggtcaaagcgtgcttttcactcaaaaacttttaaagtagagataagctatgct
gccaaaatccctttgaagtccattgtgcttgctctcaaaggagttgaggcagataatagt
actcaagatgctttaagagtgctggatattatcttgaggcagcaagcagctaacaggggg
tgccttttggtaagacaatcattctttcatgatgatatgaggaacttcactgatgttgga
gggggtgcaacgggagttaggggattccattccagttttcgcacaacccagggtggcttg
tcccttaatatggatgtgtctacaacaatggtcctaacccctggaccagttattgatttt
ctgatagctaatcagaatgtacgggaaccacgctatattgactgggtaaaggccaaaaaa
atgttgaaaaatttgagggttaagcctaggcaccgaaacatggaatacaaaattataggc
ttgagtgagaagccatgcaatcagcaatattttccgatgagaatgaaaaatggtgacaat
gcaaatggtgagccacagattgtggagataactgtgtacgattatttcactagacactgt
ggcatagaactcaccttctctgcatacctgccttgccttgatgttggcaaaccaaaacga
ccaaattatctgccaatagagctttgttcacttgtttcactccaacgctatacaaaatcc
ctatcttcaacacaaagagcatctttggttgaaaaatccagacaaaagcctctggataga
atgcgaactgtgactgatgctttgaaaaactaccgttatgatgatgatactgttctttct
gcatgtggtgtttctatagaaaaacaattgatgcaggttgatggtcgtgtgcttgagact
ccaaagttgaaggtaggaaatagcgaggactgtttcccgcgcaatggacggtggaacttc
aataacaagacactttggaaaacccatagcattgagcgctgggctgtggtaaacttttcg
gctcgctgtgatactagccaaatctctcgtgatcttattggttgtggaaggagaaaaggc
attcaaattgagcgtccatataccttaattgaggaggacccacaatctagaagaggcagt
ccagtttctagagtagaaaaaatgtttgaacagatgataccaaagcttccatgggaaccc
aaatttattttgtgcgtcttgccagagaggaaaaactctgatatttatggaccatggaag
aagaaatgtctaagtgattttggcattgttacacaatgcatttctccatttaaggttaat
gatcaatatctcaccaatgtactgctcaagatcaattctaagcttggaggaataaattct
ttgttggcaattgaggattccagacatatcccactcataaaggatactcctacaatgatt
ttgggcatggatgtgtctcatggctctcccggtcgatctgacatcccatcaatagctgca
gttgttgggtctctttattggccactgatttcaaggtatagagcttctgtgagatcgcaa
tctcccaaggtggagatgattgatgctttattcaagccttcagctaatgggagtgatgat
ggcatcatgagggagttgctagtggaattcttttgtacgagcaatgggcgcaaaccgaaa
cagattattgtgttcagggatggagtgagcgagtcacaatttaatcaagttctaaacatt
gaagttgagcaaatgataaaggcctatcagcatcttggtgaggttgatgttcccaagttc
acagtaattgttgctcagaagaatcatcacacaaagttatttcaagctagtggccctgaa
aatgttcctcctgggacagttgtggatacaaagattgtgcatcctagaaactatgatttc
tacatgtgtgctcatgcagggatgatcggaacttcaaggcctgcacactatcatgtgttg
cttgatgagattggtttctctcctgatgacttgcaaagtcttatccattctctatcttat
gtgtaccaaaggagcactactgctatttcaattgtggctcctgtatgttacgctcacctt
gctgcacagcagatggggcagtttatgaagtttgaggatttgtccgaaacttcatcagga
cagggaagcatgacatctgctggacctgtaccagttcctgagctgcctaggttgcacaag
aatgtcgcatgttcaatgttcttctgctga
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