Manihot esculenta (cassava): 110629494
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Entry
110629494 CDS
T05761
Name
(RefSeq) long chain acyl-CoA synthetase 8
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00061
Fatty acid biosynthesis
mesc00071
Fatty acid degradation
mesc01100
Metabolic pathways
mesc01212
Fatty acid metabolism
mesc04146
Peroxisome
Module
mesc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
110629494
00071 Fatty acid degradation
110629494
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
110629494
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mesc01004
]
110629494
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mesc04147
]
110629494
Enzymes [BR:
mesc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
110629494
Lipid biosynthesis proteins [BR:
mesc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
110629494
Exosome [BR:
mesc04147
]
Exosomal proteins
Exosomal proteins of breast milk
110629494
Exosomal proteins of breast cancer cells
110629494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
110629494
NCBI-ProteinID:
XP_021632173
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Position
13:7099093..7106598
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AA seq
732 aa
AA seq
DB search
MADSEATFSSSPAVENLGSSDHLSQEKGYGTYGIVGAAIVAIVLPMLLSIVFMGKKKVKQ
RGVPVEVGGEAGYAIRSGQSSHLIEVPWEGANTMASLFEQSCKKHSQYRFLGTRKLISRE
FVTASDGRKFEKLHLGDYEWQTYGQVFDRACNFASGLIRLGHNEDTRAAIFSETRAEWFI
AFQGCMRQNITVVTIYASLGEDALIHSLNETQVSTLICDSKQLKRLAAISTRLTTIKNVI
YFEDDGTATADDSISGSMSHWTVSSFSEVEKLGKHSPLPPNLPSRNGIAVIMYTSGSTGL
PKGVMITHSNIIATAAAVMTVIPNLGSNDVYLAYLPLAHVLELAAESIMLTAGCAIGYGS
ALTLTDTANKIKKGTKGDASVLNPTLMAAVPAILDRVRDGVLKKVQEKGGFAKKLFNIVY
KRRLAAIEGSWFGAWGLERMLWDAIVFKSIRDVLGGRIRFILCGGAPLSAESQRFVNICM
GAPIAQGYGLTETCAGAAFSGWDDTSVGRVGPPLPCCYIKLVSWEEGGYKISDKPMPRGE
IVVGGFCVTRGYFNNKEKTDEVYKVDEKGMRWFYTGDIGRFHPDGCLEIIDRKKDIVKLQ
HGEYISLGKVEAALMSSNYVDNIMAYADSFKNYCVALVVPSHQALEKWAQQVGIKYRDFA
ELCNKDETIAEVQQSLSKVGKAAKLDKFEIPEKIKLLPDPWTPESGLVTAALKIKREQLK
SKFKDELQKLYD
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggcggattctgaggcaaccttttcgagctcaccagctgtggaaaatttaggttctagc
gatcacttgtcacaagagaaaggctatggaacatatggcattgtgggtgctgccattgtt
gcgattgttttacctatgttgctctccattgtgttcatggggaagaaaaaggtgaagcaa
agaggagttcctgtagaagttggtggcgaggcaggttatgcaattcgcagtggccaaagc
tctcatttgattgaagtcccttgggagggggcaaataccatggcctcgctttttgagcaa
tcttgcaaaaagcattcacaatatcgatttcttggaacaaggaagctaattagcagagaa
tttgtcacagctagtgatggtagaaagtttgagaagctgcacttgggggattatgaatgg
caaacttatggacaagtttttgatcgtgcttgcaactttgcttctgggcttattaggtta
ggtcataatgaggatactcgtgctgcaattttttctgaaacacgagcagagtggttcatt
gccttccagggatgcatgcggcagaatatcactgttgttactatttatgcatctcttggt
gaggatgctctgatccattcactcaatgagacacaagtatcaaccctgatttgtgattcc
aagcaattgaaaaggttggctgctataagcacaagactaacaaccatcaagaatgtgatt
tactttgaagatgatggaactgcaactgcagatgatagtatctctgggagtatgagccat
tggacagtttcatctttttctgaagttgagaaactgggcaaacacagtcctcttcctcca
aacctgccttccaggaatggaattgctgttatcatgtatacaagtggcagcacaggccta
ccaaagggagtcatgattactcatagcaacattatagccactgctgcagctgtcatgaca
gtgattcctaatctgggtagtaatgatgtttatttggcatacttgccattagctcatgtt
ctcgaacttgctgctgagtctataatgttaactgcagggtgtgcaattggctatggttcc
gcattgactttaacagacacagctaataaaataaaaaaaggaaccaaaggtgatgcttct
gtgttgaatcccactcttatggcagcggttcctgctatactagatcgtgttcgggatgga
gttctaaaaaaggttcaggagaaaggcggatttgcaaagaagcttttcaacattgtatat
aagcggcgattagcagccatagaaggaagctggtttggtgcttggggactggaaagaatg
ttgtgggatgctattgtcttcaaatcaatacgtgatgtacttggaggccgtatccgattt
atactatgtggtggtgctccattatctgcggaatcacaacgattcgtcaatatttgcatg
ggggctccgatagctcagggttatggcttgacagaaacatgtgctggagctgccttttct
gggtgggatgacacatctgtgggccgtgttggacctcctcttccatgctgctatattaag
cttgtttcttgggaagaaggtgggtacaagatatctgacaagccaatgccccgaggagaa
attgttgttggaggattctgtgtaactaggggttactttaacaacaaagaaaaaacggat
gaggtctacaaggtagatgaaaaaggcatgcgctggttttatactggtgatattggacgt
tttcaccccgatggatgccttgaaattatagacagaaagaaggatattgtcaaacttcaa
catggagagtacatctccctcggaaaggttgaggcagcgctgatgtcaagtaactacgtg
gataatatcatggcatatgcagattccttcaaaaactattgtgtagctcttgttgttcca
tcacatcaagccttagagaaatgggcccagcaagttggcatcaagtaccgggactttgca
gagctctgtaacaaagatgaaacaattgctgaggttcaacagtcactgtccaaggtagga
aaagctgcaaaactagacaagtttgaaattcctgaaaagatcaagctgttaccagatccg
tggacacctgaatctggcttagttactgctgctctcaagatcaagagggaacaactgaag
tccaaatttaaagatgagctccaaaagctctacgactga
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