Manihot esculenta (cassava): 110629540
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Entry
110629540 CDS
T05761
Name
(RefSeq) zinc finger protein NUTCRACKER
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110629540
Transcription factors [BR:
mesc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110629540
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Ortholog
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_STOP2_C
zf-met
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
110629540
NCBI-ProteinID:
XP_021632251
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Position
13:35507418..35510149
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AA seq
483 aa
AA seq
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MLENMDEEAISSNGSFVQNPVAGSNLPSVKRKRNLPGNPDPEAEVIALSPKTLMATNRFL
CEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTCVHHHPSRALGDLT
GIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYKCDCGTLFSRRDSFITHR
AFCDALAEETARLNAEANINGLAAVSANFNYHHLMGTSPVAPNMAQHFPSIFKPISSNDQ
AMDQTPRGLSLWVSQEPQVHHEAIGSNNGMQEIHQLGSMVSSGTIFCEPLVSSSNPSPSD
HYQLNWPFLGNKFSSSNAHEELTSTNSLPLNNVKDAAAAAQLVSVPSLYSTQQQSHQTSS
AANMSATALLQKAAQIGATSTDPSFLGSFGLKCNSNSIQEAGNKYCGLYGSNSINTSTNL
ASDVENSAGNDISSLNHQLQMYPTAKRQKIQSDQENTGGQTRDFLGVGVQQAICHPSTMN
GWI
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgttagagaatatggatgaagaagcaatctccagtaatggcagttttgttcaaaaccca
gttgctggatctaatcttccttctgtaaagaggaagagaaacctcccaggaaacccagat
cctgaagccgaagtcatagccttgtcgccgaaaactctcatggcaaccaacagattcttg
tgtgaaatatgtgggaaaggtttccaaagagatcagaatctacaactccatcgccgggga
cacaatcttccatggaagctcaagcagaggactagtaaggaagtgagaaaacgagtctac
gtctgcccagaaaagacttgtgtccatcaccatccttctagggctcttggagacctaact
ggtataaagaagcatttctgcagaaaacatggggagaaaaagtggaagtgcgacaagtgt
tcaaagagatacgctgtgcaatctgattggaaagctcactcaaaaacctgtggcactagg
gagtacaaatgcgactgtggaactctattttctcggagagatagcttcatcacccacagg
gcgttctgtgatgcattagctgaagaaacagcaagattaaatgcagaagctaacataaat
ggcttagctgcagtttccgccaacttcaactaccatcatcttatggggacgagtcctgta
gcgcctaacatggcacagcatttcccttcaattttcaagccaatctcaagcaatgaccag
gcaatggaccaaactccaagaggactctccttgtgggtgagccaagaaccccaagttcac
catgaagcaataggcagcaacaatggtatgcaagagattcaccaacttggatctatggtt
tcatcaggaacaatattttgtgagcctcttgtttcatcttcaaatccttcaccgtctgat
cattatcagttaaattggcctttcttgggaaacaagttctcttcaagcaatgctcatgaa
gagttaacaagcacaaactcacttccattaaacaacgttaaggatgctgcagcagcagct
caactagtgagtgttccttctttatatagcacacaacagcagtcccatcaaacaagttca
gcagcaaatatgtcagccacagccctacttcaaaaagctgctcaaattggtgcaacttca
actgacccatcatttcttggaagttttggattaaagtgcaacagtaacagtattcaagaa
gctgggaacaagtactgtggattatatggctcaaactcaataaacacaagtacaaatctc
gcaagtgatgtggaaaactcagcagggaatgatatttccagcttaaatcatcagctgcaa
atgtacccaacagccaaacgccaaaaaatacagagcgaccaagagaatacaggagggcaa
actagagactttcttggagttggtgtacaacaagccatatgccacccatcaactatgaat
gggtggatttga
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