Manihot esculenta (cassava): 110629553
Help
Entry
110629553 CDS
T05761
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''alpha isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03015
mRNA surveillance pathway
mesc04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110629553
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
110629553
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mesc01009
]
110629553
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110629553
03036 Chromosome and associated proteins [BR:
mesc03036
]
110629553
Protein phosphatases and associated proteins [BR:
mesc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
110629553
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
110629553
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
110629553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
Phage_Inh_C
DUF4187
Motif
Other DBs
NCBI-GeneID:
110629553
NCBI-ProteinID:
XP_021632267
LinkDB
All DBs
Position
13:4423379..4433859
Genome browser
AA seq
542 aa
AA seq
DB search
MDIDMVGGGGDAPYLDPELLQLPEVSPFVLKASPQLAEELFSQWLSLPDTIRLVKSLIDD
AKVGNPVNFFGISVNTSASGGNSLPSLFPAGSAPPLSPRSSSGSPRMSKQKTGPSSLGSP
LKLVSEPVQEFIPQFYFQNGRPPANELREQCILRIKHFFSNHLDGLRIDEFKSITKEICK
LPSFFSSAIFRKIDSDCYGIVTRDAFIKYWVDGNMLAMDRTTCIFNILKQPEHYYLIQTD
FKPVLRELLTTHPGLEFLQSTPEFQERYAETVIYRIFYYINRSGNGRLTLRELKRGNVIA
AMQHADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLLRYGNHALTYRIVD
RIFSQVPRKFTSNIEGKMGYEDFVYFMLSEEDKSSEPSLEYWFKCLDLDGNGVLTPNEMQ
FFYEEQLHRMECISQEPVLFEDILCQIVDMIAPEVEDYITLRDLKRSKLSGNFFNILFNL
NKFMAYESRDPFLIRQEREEPNLTEWDRFAHREYIRLSMEEDVEDVSNGSADVWDESLEA
PF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgatatggtgggtggtggtggagatgctccttatttggaccctgagttgttg
cagcttccagaagtgtctccatttgtactcaaagcgagtcctcagcttgcagaggagttg
ttctctcagtggctgtcacttccagataccatacgactggtgaaatctttaattgatgat
gcaaaagttggcaatcccgttaacttctttgggatctccgttaatacaagtgcttctggg
ggcaattcattgccttccttgtttcctgctggtagtgcacctccgctttcaccaagaagt
tcatctggttctccacgcatgtccaagcaaaagacaggcccttcttctttgggttctcca
ttaaaattagttagtgaaccagtacaagaattcatacctcagttctattttcaaaatggt
cgtccaccggcgaatgaactgagagaacaatgtatcttgagaattaaacactttttcagt
aatcatttggatggattgcgaatagatgaatttaaatctattacaaaggaaatttgcaag
ttaccgtctttcttctcctctgcaatttttaggaagatagatagtgactgctatgggata
gtgacaagggatgcattcattaaatactgggtggatggcaatatgctggccatggacaga
acaacttgcatattcaatattctaaagcagccagaacactattacttgatacagactgac
ttcaaacctgttcttcgagaacttttgacaacacatccagggttggaattcttacaaagc
acacctgagtttcaggaaagatatgctgaaacggtcatatatagaatattctattacatc
aatagatcaggaaacggccggcttacccttagggagctgaaacgtggtaatgtcattgct
gcaatgcaacatgcagatgaagaggaggacattaacaaagtcctgaggtacttttcttat
gaacatttctatgttatatactgcaagttttgggaactggatacagaccatgatttcttg
attgataaggagaatctccttcgatatgggaatcatgccctcacctacaggattgttgac
agaatattttcacaggttccaaggaagtttactagcaatattgaagggaaaatgggctat
gaagattttgtttattttatgctttcagaagaggataagtcatcggagcctagtcttgaa
tattggttcaagtgcttagatttggatggaaatggcgtgttgacacccaatgaaatgcaa
ttcttctatgaggagcagttgcaccgtatggagtgcatatctcaggagcctgtgctattt
gaggatatcttgtgtcaaatagtcgatatgatcgcaccagaggtagaagattatataaca
ttgcgtgacttgaaaagaagcaaactctcgggaaattttttcaatattctgttcaatctc
aataaattcatggcttatgaaagccgtgatccatttctaattcgccaggaacgtgaggaa
ccaaatttgacagagtgggatcgctttgcacatagggagtacatcaggctttcaatggaa
gaagatgtggaggatgtctcaaatggaagtgcagatgtttgggatgaatcacttgaggct
cctttctaa
DBGET
integrated database retrieval system
