Manihot esculenta (cassava): 110629568
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Entry
110629568 CDS
T05761
Name
(RefSeq) chromatin assembly factor 1 subunit FAS2 isoform X1
KO
K10751
chromatin assembly factor 1 subunit B
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mesc03036
]
110629568
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
110629568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_DCAF12
TFIIIC_delta
Beta-prop_IP5PC_F
WH_KIN17
Motif
Other DBs
NCBI-GeneID:
110629568
NCBI-ProteinID:
XP_021632284
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Position
13:14647136..14653235
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AA seq
460 aa
AA seq
DB search
MKGGTVQINWHGTKPVLTLDFHPISGLLATGGADFDIKLWLINSGEAQKKIPTSTYQNSL
SHHCSAVNTLRFSKSGDLLASGADGGELIVWKLHSTETGQTWKVLKNLSFHRKDILDLQW
SPDGAFLISGSVDNSCIIWDVNKGSVHQLLDSHFHYVQGVAWDPLTKYVASLSSDRTCRV
YMNKPQLKTKAVEKMNYVCQHVIAKTEHQSADDSKSSKNHLFHDETLPSFFRRLAWSPDG
SFLLVPAGSHKIPPASDAVNTAYAFSRKDFSRPALMLPGASKPVVAVRFCPMAFSLRESD
SAGFFKLPYRLIFAVATLNSLYIYDTESAPPIAILAGLHYAAITDIAWSLSAQYLAVSSQ
DGYCTLVEFETNELGLPIPLAVSAAEHKKDLVHENKSPIIDKREEIVIETPADAGSIAEN
SKKTDVEKNEGKQASPSSISIPISNKPAKRRITPMAIDPK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaagggaggaactgttcagatcaattggcatggcacaaaacctgtcctaaccctagac
tttcaccccatttccggtctcctcgccaccggcggcgccgacttcgacatcaagctttgg
ttaataaattcaggtgaagcgcagaaaaaaatcccaacatctacttatcaaaatagcctt
tcccaccattgttctgctgtgaatactcttcgtttctccaagtccggagatctacttgcc
tccggtgccgatggtggggagttgattgtatggaagttacactctacagaaactggtcaa
acatggaaagttctcaagaatttatcctttcatcgcaaagacattttggatctgcaatgg
tctcctgatggtgcatttttgatctctggatcagttgataattcttgcatcatatgggat
gttaacaaaggttctgtgcatcagttattggatagtcatttccattatgttcaaggtgtg
gcttgggatccgttgaccaagtatgttgcttctcttagttcagatagaacttgccgagtt
tatatgaacaagcctcagttaaaaacaaaagctgttgagaagatgaattatgtttgtcaa
catgtcattgcaaagacagagcaccagtctgcagatgattctaagtcttcaaaaaaccat
ctctttcatgatgaaacgttgccatctttcttccgaagattagcatggtcacctgacgga
tcatttttacttgtgcccgcaggttctcacaaaataccacctgcatcagatgcagtaaat
actgcttatgcattttccaggaaggatttctcaaggcctgctttaatgctccctggtgct
agtaaacctgtcgtagctgttcgattttgccccatggcttttagcctgagggaatcggac
tcagctggtttcttcaagcttccgtatcgcctaatttttgcagtggctactttaaactcc
ttgtatatctatgatacagaaagtgctcctccaatagcaatcttggccggtcttcactat
gcagccataactgatattgcctggtcattgagtgcccagtatttggctgtatcttctcaa
gatggttattgtactttggtagaatttgaaaccaatgaactgggattgcccatcccctta
gcagtatctgctgcagagcacaagaaagacctggttcatgagaataaaagccctattatt
gacaaacgagaggaaatagtgatcgaaacacctgcagatgctggttccatagcagagaat
agcaaaaagacagatgtggagaagaatgaagggaaacaggcatcccctagctcaattagt
attcctatctcaaataaacctgccaagagacgaatcacccctatggcaatcgatccaaaa
taa
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