Manihot esculenta (cassava): 110629633
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Entry
110629633 CDS
T05761
Name
(RefSeq) pre-mRNA-splicing factor SLU7-A
KO
K12819
pre-mRNA-processing factor SLU7
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110629633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mesc03041
]
110629633
Spliceosome [BR:
mesc03041
]
Complex C
Other components
Step II factors
110629633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
110629633
NCBI-ProteinID:
XP_021632391
LinkDB
All DBs
Position
13:4201550..4206137
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AA seq
537 aa
AA seq
DB search
MATSSVAFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLDNSQK
PSLRHQRKWKSDPNYSKSWYDRGAKVYQAEKYRKGACENCGAMTHDVKSCMERPRKLGAK
WTNKHIAPDEKIESFELDYDGKRDRWNGYDTSNYARVVERYEARDAARSKHLKEQQLKKL
EEKNSNQIDEAGASDEDNYEDDLRVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLR
IREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNEKFYGGDNQYRNSGQALEFKQLN
IHAWEAFDKGQDIHMQAAPSQAELLYKNYKVIKEKLKTQTKDTIMEKYGNAANEEELPRE
LLLGQSERQVEYDRAGRIIKGQENVLPKSKYEEDVYINNHTSVWGSWWKDHLWGYKCCKQ
TIRNSYCTGAAGIKAAEAATDLMKANIARKETTEELPAPVEEKRLATWGTEVPDDLVLDE
KLLSEALRKENDRKKEEKDERKRKYNVTWNDEVTPEEMEAYRMKKIHHDDPMKNFLH
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcaacctcatcagttgcgtttaagtcaagggaggatcacagaaagcaaattgaattg
gaagaagcacgtaaagcaggacttgcacctgctgaggttgatgaggatggaaaggagatt
aatcctcatattcctcagtatatgtcttctgctccttggtatcttgataattctcagaaa
cctagcttgagacatcaaaggaagtggaaatcggacccaaattattcaaagtcatggtat
gacagaggtgcaaaagtttatcaagcggaaaaatacaggaagggtgcatgtgagaactgt
ggagccatgacccatgatgtaaagtcatgcatggaaagacctcggaaactgggtgcaaag
tggacaaacaaacacattgctcctgatgaaaaaatagagtcgtttgagcttgattatgat
ggcaagcgtgataggtggaatgggtatgacacgtccaattatgcccgtgttgttgagagg
tatgaagcacgagatgcagctcggagtaagcatctaaaggaacaacaacttaagaaattg
gaggagaaaaacagtaaccaaattgatgaggctggggctagtgatgaagacaactatgaa
gatgatttgagggtggatgaagccaaggtcgatgagagcaaacaaatggattttgctaag
gtagagaagcgtgtacgaacaactggtggtgggagcacaggaactgtcaggaatttgcgt
attcgggaggatacagcaaaatatcttttaaatcttgatgttaactctgcgcattatgac
cccaaaacccggtcaatgcgtgaagatcctcttccagatgcagatccaaatgagaagttt
tatgggggagataatcaatacagaaatagtggtcaagctttggagttcaagcagctgaac
attcatgcttgggaggcatttgacaaggggcaagacattcacatgcaagcagctccatcc
caagcagagttgttatacaagaattataaggtcataaaggagaaactgaagactcaaaca
aaggacacaatcatggagaagtatggcaatgctgccaatgaagaagaactcccaagagag
ctcttgctgggacaaagtgaaagacaagttgaatatgatcgtgctggacgaataataaag
gggcaggagaatgtgcttcctaaaagcaagtatgaagaagatgtttacattaacaatcat
acaagtgtgtggggttcatggtggaaggatcatctatggggctacaagtgttgcaagcag
acaattcggaacagctattgcacaggtgcagccggaattaaggctgctgaggctgcaact
gatctcatgaaggctaatattgctcgcaaagagaccactgaagagttgccagcaccagtg
gaggagaaaaggcttgctacttggggaactgaagttccagatgatctggtcttggatgag
aagttgctttctgaagcacttagaaaggagaatgacagaaagaaagaggaaaaagatgaa
aggaagcgcaagtataacgttacatggaatgacgaggttactcccgaagaaatggaggcg
tataggatgaaaaaaatacatcatgatgacccaatgaagaatttcctacactag
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