Manihot esculenta (cassava): 110629661
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Entry
110629661 CDS
T05761
Name
(RefSeq) YTH domain-containing protein ECT1 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110629661
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110629661
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
YTH
RE_AspBHI_N
DUF3942
DUF2202
Motif
Other DBs
NCBI-GeneID:
110629661
NCBI-ProteinID:
XP_021632431
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Position
13:1477523..1482568
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AA seq
598 aa
AA seq
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MVQNMSQDQPSLVLDENVVDSSRAAIAVGSLRVDAPPNASPSQTQSACHGGNGNIVGTWG
TCLPDVNAEGLDSSYGIYNDPSSLPFHGNGYTPQMPQRPFASFATPPPSVNCHGQLYNVQ
DLPNSDPSFYQHFMTPNVPSIVSQTSLSSAKWPDSINSQGDGNRFGHQPGYLPAMGTFGR
GSNYPGDTGGFNLLEQGYAGFESNGLWSDWPKPGNGKGSMLHLSSATTGPKPVGSLGFSA
NHFGMASQQKESFYGFGTRASNKSYPQGQTNRNSGYDVSSSMFGINGQSWPTLHEARQAG
RCNDFSCSCNFALDTLGERNRGPRAFKPRSQTSANGSVIDSRRTAVSDVYNESYNRLDFV
TDYKDAKFFVIKSYSEDNVHKSIKYGVWASTPNGNKKLDAAYHEAKEKTGTSPIFLLFSV
NASAQFCGVAEMVGAVDFDKSVDYWQQDKWSGQFPVKWHIIKDVPNSQFRHIVLENNDNK
PVTNSRDTQEVELEHGVEMLKIFKNYESHSSILDDFHFYEERQKAMQARKSRQQQQSSLV
PTSVIGDGEQSPVSISNDFIKKMSKSFAEALSVNETVTELSISHLPQGAMGFENEKRS
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggtccaaaacatgtcgcaggatcagccttctctggtcttagatgaaaatgtggttgat
tcttcaagggctgctattgctgttgggtctttaagggttgatgctccacccaatgcttct
ccctctcaaacacagtcagcctgtcatggaggtaatggtaatatagttggcacatggggt
acatgccttccagatgttaatgctgaaggcttggatagttcttatggaatctacaatgat
ccttcatcacttccatttcatggcaatgggtacactcctcaaatgccacaaaggccattt
gcctcatttgcaacacctcccccttctgtaaattgtcatggccagctttacaatgtccaa
gatttaccaaactcagatccatctttttaccaacatttcatgactccaaatgttcctagc
attgtttcacaaacgtcactttcttctgctaagtggccagatagcattaattcccaagga
gatggcaacagatttgggcaccaaccaggttatctgcctgcaatgggaacttttgggaga
ggaagcaattatccaggagatactggaggatttaatcttttggagcaaggctatgctggg
tttgaaagcaatggattgtggtcggattggccaaaacctgggaatgggaaaggttctatg
ttgcatttgtcatcagcaacaactggtccaaaaccagttggttcactaggtttttctgca
aatcattttggaatggcgtctcaacaaaaagaatcattttatgggtttggaactcgtgcc
agcaataaaagctatcctcaaggacaaacgaatcgaaactctggctatgatgtttcctct
tccatgtttggaataaatggtcagagctggcccacgcttcatgaagcaagacaagcagga
aggtgcaatgacttctcatgtagttgtaattttgcacttgatacattgggtgagagaaat
agaggacctagggcatttaagccaagaagtcagacatcagcaaatggatctgtaattgac
agtcgcaggactgcagtttctgatgtttataatgagtcttacaaccgccttgattttgtc
accgattacaaggatgcaaagttcttcgttatcaaatcttacagtgaagataatgttcat
aagagcataaagtatggtgtctgggcaagtaccccaaatggcaacaaaaaattagatgct
gcttatcatgaggcaaaggagaaaactgggacatctccaatctttctgttgttttcggtg
aatgctagtgctcagttttgtggagtggctgagatggttggggctgtggactttgacaag
agtgtggattactggcagcaggataagtggtctggacagtttcctgtcaagtggcacatt
attaaagatgtccctaacagtcagtttcgtcatattgtgcttgaaaataatgacaacaaa
ccagtcaccaacagtagagatactcaagaggtggaacttgaacatggtgttgaaatgtta
aaaatatttaagaactatgaaagtcattcatccatcctagatgattttcatttttatgaa
gagcggcagaaagcgatgcaggcaaggaagtcgagacaacaacagcaatcaagtctggtg
cctacttcagtgattggagatggtgaacaaagtcctgtttcaatttctaatgatttcata
aagaaaatgtctaagagctttgctgaagctctgtctgttaatgagacagtaacagagctg
tctatttcacatctgcctcagggggccatgggatttgaaaatgaaaaaagaagctga
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