Manihot esculenta (cassava): 110629881
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Entry
110629881 CDS
T05761
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI8
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110629881
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
110629881
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
110629881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
IBR_2
UBA_ARI1
Ariadne
Zn_ribbon_RanBP
zf-C3HC4_2
UBA_ARIH2_N
Rcat_RNF216
zf-RING_5
zf-C3HC4
ZapD
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
110629881
NCBI-ProteinID:
XP_021632765
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All DBs
Position
13:714349..726073
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AA seq
590 aa
AA seq
DB search
MDSEDEFDMQDAAAESADDDFYSGGDDVFDSDDADVADYEFIDNDSDDSDDLISHRYQQN
YTVLGEADIRQRQEDDVMRISTVLSISKVSASILLRYYNWSVSKVHDEWFADEEKVRKVV
GLLEKPVVEFPDGREMTCGICFETYPCDRLHVAACGHPFCSTCWQGYISTAINDGPGCLM
LRCPDPSCSAAVGQDMINELASDEDKEKYSRYFIRSYVEDNRKTKWCPAPGCDYAVDFIV
GSGSYDVTCRCSYSFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPKCK
RPIEKNQGCMHITCTPPCQFEFCWLCLGAWSDHGERTGGFYACNRYETAKQEGVYDEAEK
RREMAKNSLERYTHYYERWATNQSSRQKALADLQQMQTVHLEKLSDIQCQPESQLKFITE
AWLQIVECRRVLKWTYAYGYYLPEHEHGKRIFFEYLQGEAESGLERLHQCAEKELQTYLN
SEGPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVDSHGACSRTTSSKSLGGGSS
RGRSGRGKGSTSRSSGPSRNIDDSGHWSCEHCTFANIRSATICAMCQQRK
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggactcggaggatgagttcgatatgcaggacgctgccgctgaatccgccgatgatgat
ttctacagcggaggtgatgatgtttttgacagcgatgatgctgatgttgctgattacgag
ttcatcgataacgattccgatgattccgatgaccttatctcccaccgctaccagcaaaac
tatactgttctgggtgaagcagatattcgtcaacgtcaagaagatgatgttatgaggata
tctactgtgctttcaatttccaaggtttcggctagcattttgctccgttattataactgg
agtgtcagtaaagtgcacgatgaatggtttgcagatgaagaaaaggttcgcaaggttgtt
ggcttattggagaaaccagttgttgaatttcctgatggcagagaaatgacatgcggaatt
tgttttgaaacctatccttgtgataggttgcatgttgcggcttgtggtcatccgttttgt
agtacatgctggcaaggctacataagcacagctattaatgatggtcctggatgtttgatg
ttgcgatgtcctgatccttcctgcagtgctgctgttggtcaagatatgattaatgagttg
gcttctgatgaagacaaggaaaagtattcccgctatttcattagatcttatgttgaggac
aacagaaagaccaaatggtgccctgctccaggatgtgattatgctgtggattttattgtt
ggcagtggaagctatgatgtaacttgtcgctgctcatatagcttctgttggaattgtact
gaagaagcccatcgtcctgttgattgtggaactgtagccaagtggattctaaaaaatagt
gccgagtctgaaaatatgaactggatattggctaattccaaaccctgtccaaagtgcaaa
cggccaatcgagaaaaaccagggctgtatgcatattacttgcacaccgccttgtcaattt
gagttttgctggctttgccttggtgcatggtcagatcatggagaaaggactggtggtttt
tatgcatgcaatcgttatgaaacagcaaagcaagagggagtgtatgatgaggctgaaaag
agaagagaaatggccaaaaactctctagagagatatactcattattatgaacgatgggca
accaaccaatcttctaggcaaaaggcactggcagacctacagcaaatgcagactgtgcat
ctcgagaagttgagcgacatacagtgtcaaccggagtcacagctaaagttcataactgag
gcctggttacagatagttgaatgcaggcgagtcttgaaatggacttatgcttatggatat
tatttacctgagcatgaacatggcaagagaatattctttgagtatttgcaaggtgaagct
gagtctggtttggaacgccttcatcaatgtgctgagaaggagctccaaacttatctaaat
tcagagggcccatcaaaggatttcaatgagttccgcaccaaacttgctggattgaccagt
gtgactcggaactatttcgagaatttagttcgagctttggagaatggtctatcagatgtg
gactctcatggtgcgtgcagcaggacaacaagctcaaagagcttgggaggtggaagcagc
agggggagaagtgggagaggcaagggttcaacttccagatcaagtggccctagcagaaat
attgatgattcaggccactggtcatgtgaacattgtacgtttgcaaatatcaggtcggct
accatctgtgcaatgtgccagcaaagaaaatag
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