Manihot esculenta (cassava): 110629918
Help
Entry
110629918 CDS
T05761
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase FLY2 isoform X1
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110629918
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110629918
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110629918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
zf-C3HC4
PHD_NSD
zf-ANAPC11
DUF2921
zf-RING_UBOX
zf-RING_16
zf_RING_Vps8
zf-P11
Motif
Other DBs
NCBI-GeneID:
110629918
NCBI-ProteinID:
XP_021632823
LinkDB
All DBs
Position
13:complement(35827320..35839155)
Genome browser
AA seq
570 aa
AA seq
DB search
MVDCENLGFLYVHRRGRLGFVFRLVFGLWFGFVVLSPVAGLRPLKERNRSWGDEWLFIRK
DENDLGPFSAWNITGTYRGTWKFLDSTNSSSRFPDFRKSNGESVIELVSTPTKITGVHYV
QGVIIFHDVFDNTHNVGGAQIRVEGVYIWPFRQLRMVANSGKEGELSQEEDYILSNPYHL
LGVFSSQVFQESPRDKIWRRKNSPIYEMEKHCNIEIAAQITRVSSSQNDGDRDRYHIEGL
MESPAVDDDGDCFSPLLLNATSVNIEVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSNTQ
SGAAKVSILMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLA
IWKASRPMNSGEGWETMRRELSVLYSRFYGILLGGILVMYEFHNFLRPILLLMYSFWIPQ
IFTNVIRDSRKPLHPHYIIGMTITRLAIPLYIFGCPNNFMRIEPDKTWCMCLSIFIGLQA
SVLLLQHYLGSRWFIPRQILPEKYSYYRRFDQDTTQATDCVICMTAIDLTQRSNDCMVTP
CDHFFHSGCLQRWMDIKMECPTCRRPLPPA
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggttgattgtgagaatttgggttttctgtatgttcacagaaggggacggttagggttt
gtttttcggcttgtttttggtttatggtttgggtttgtggttttaagtcctgtggcgggt
ctcagacccttgaaggaacggaatcgatcttggggagatgagtggctatttattagaaaa
gatgaaaatgatttgggcccattttcggcatggaacataacaggaacttacagagggact
tggaaattcctagattccacgaatagctcttccaggtttccagatttcagaaaatccaac
ggagaatctgtcattgaattagttagcacaccaacaaaaataacaggtgtacattatgtc
cagggtgttattattttccatgacgtgtttgacaatacacataatgttggtggtgctcaa
atcagggtggaaggtgtttacatatggccctttagacaacttcgaatggtagctaacagt
gggaaagagggggagttgagccaagaagaagattatattttatccaacccatatcatttg
cttggggttttctcatctcaagtgttccaagaatctccacgagataaaatatggaggaga
aaaaattcaccaatttatgagatggagaaacattgcaatattgaaattgcagcccaaatc
actcgtgtttcttctagccaaaatgatggagaccgtgatcgttatcacatagaagggtta
atggagagtcctgccgtggatgatgatggggactgcttctcacctttactgctaaatgct
acttctgtcaacatcgaagtatactacaataaagcagtgaactataccttgatggtcact
tttgtctctttcctccaggttcttctgttgattcgacaaatggaacatagcaatacccaa
tcaggagctgccaaagtttcaattttaatgattgggcagcaggctatcatggatgcttat
ctttgccttttacatttgacagcaggaatattagttgagtccttatttaatgcttttgca
actgctgcatttttcaagtttgtagtcttctcaatttttgagatgagatatcttcttgct
atctggaaagcaagcaggcccatgaatagcggtgagggttgggagacaatgaggcgtgag
ctctcagttctatatagtcgtttttatgggatccttttgggtggcattttggtcatgtat
gagttccataattttctgagaccaattctgctcttgatgtactctttttggataccccag
attttcactaatgttattcgtgattcaagaaaacctttgcatcctcattatatcataggc
atgaccattactcggctagcaatcccactgtatatatttggatgccctaacaacttcatg
cgcattgagcctgacaagacttggtgtatgtgtttgagcatatttatcggacttcaagca
tcggttcttcttcttcaacactatcttggctctcggtggttcattcctcggcagattttg
cccgagaagtatagctactatagaaggtttgaccaggatacaactcaggcaacagactgt
gttatctgcatgactgcaattgatctcacccagcgttctaatgattgcatggtgactcca
tgcgatcatttttttcattccggttgtttacaacggtggatggatatcaaaatggaatgc
ccaacttgccggcgaccactaccaccagcttag
DBGET
integrated database retrieval system
