Manihot esculenta (cassava): 110629932
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Entry
110629932 CDS
T05761
Name
(RefSeq) GPI transamidase component PIG-S isoform X1
KO
K05291
GPI-anchor transamidase subunit S
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
mesc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
110629932
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Gene cluster
GFIT
Motif
Pfam:
PIG-S
Motif
Other DBs
NCBI-GeneID:
110629932
NCBI-ProteinID:
XP_021632840
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Position
13:complement(5550229..5558173)
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AA seq
621 aa
AA seq
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MAEISEPVNPADPTSEISKTHQAPPQVPASYFDPETMRTTKPGLKRLFLTVSVLLSFLLG
FPFLWKSVEIYRSPLPFEDMDTLSKEIESNPLQFPCQFQAIFIDSNPQSSFSVLNPHYLH
QSILSQMTKLTPKTPQCGTCSSNFNLSVTLDFIGGDCTQSFPGNPSCLYKCGTIPAVDFD
FGDEEGVDDVLESVLGDRCSGFGGKMYSVVVVNRDDVQVVRTVVGKYRHSWIVGRHLEAE
TVVERVAEIFVNVFVNGGREEGLIHGEFMPVGSDGRIVLSFNLLNANPRDWIYDWDFQTI
DETLLPPVIEALEPIANISVESQVLYHTPKSSFSSWDEKLGSYVFSVKDLPFFVNSNEWH
LDTSIAAGGRSKILQFVVYVPSAKECPLLLRLPDGQISATNGFITPMWGGVMVWNPSTCL
KDSEDKLPGRHMISTQDLHKVFEVFMGQFRQLFDLKSDSIYVGAYGDYNLLTSEIGFTEW
ELDVLSRKHTCFNVHSSATTLGSLSRLVQSLPRMIIMDEIGKQVKFSLESAKLAQLNSTI
GVYDASAVSSRHARSLAEDAFFHPSIMSVSYYSFEHCFAVYSPFFLPVAMHVLLAALREW
KRYKQENAKYLLWKAKVKVAS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaatctcagaacctgtgaatcccgccgatcccacatctgaaatatcgaaaacc
caccaagcaccgccgcaagttcccgcatcatatttcgaccctgaaaccatgcgtaccaca
aaacctggattgaaacgcctcttcctcaccgtctcagtccttctctccttccttctaggt
ttccccttcttgtggaaatcagtggaaatttaccgttcaccgctcccatttgaagacatg
gatacgctttcgaaggaaattgaatcgaatcctttgcaattcccatgccagttccaagct
atattcattgattccaatcctcaatcttctttctctgttctcaatccacattacctacac
cagtcaatcctttcccaaatgactaaactgaccccaaaaactcctcagtgcggtacttgc
tctagtaatttcaatctttcagtcactttagactttattggtggagattgcactcagtca
ttccctggtaatccatcttgcttgtacaaatgtggtacaattcctgctgtcgattttgat
tttggcgatgaagagggtgtcgatgatgttttggagtctgttttgggagatcgttgttcg
ggttttggcgggaaaatgtatagtgtggtggtggtgaatcgggatgacgttcaggtggta
aggacggtggtagggaagtatcggcattcgtggattgtggggaggcatttggaagctgag
acagttgtggagagagtggcggagatatttgtgaatgtgtttgtcaatgggggcagggag
gaaggattgattcatggggaattcatgcctgtaggttccgatggaaggattgttctatcc
tttaatttgctcaatgcaaatccgcgtgattggatttatgattgggattttcagaccata
gatgagactttgttgccccctgtgattgaagcattggaacctatagccaacataagtgtg
gaaagccaggttttgtaccatacaccgaaatcctcattttcttcctgggatgaaaagttg
ggcagctatgtctttagtgtgaaggatcttcctttctttgtgaattcaaatgagtggcac
ttagatacttctattgcagctggtgggcgatcaaagatattgcaatttgtggtatatgtg
ccatctgcaaaggaatgtcctcttcttcttcggcttccagatggacaaatttctgcaaca
aatggttttattactccaatgtggggaggtgttatggtgtggaatccatcaacctgttta
aaagattcagaagataagcttcctgggaggcatatgatatccacacaggatcttcacaag
gtttttgaagttttcatgggtcagttccggcaactttttgatctcaaatctgatagtatt
tatgttggtgcatatggcgattacaatctcttaacgagtgaaataggcttcacggaatgg
gaattggatgtcttatcccggaagcatacttgttttaatgttcattcaagtgctacaacc
cttggatctttatctagattggttcaatcattaccaaggatgattatcatggatgagata
ggaaagcaggtgaagttctctctggaatcagcaaaattggctcaacttaattccactata
ggagtttatgatgcttcagctgtgtcatcaaggcatgcaaggtctttggcagaagatgcc
tttttccacccatccattatgtctgtcagctactactcatttgagcactgttttgcagta
tactcgcctttcttccttcctgttgcaatgcatgttctccttgcggctttaagagaatgg
aagagatataagcaagaaaatgccaagtacttattatggaaggctaaagtaaaggtagca
tcttag
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