Manihot esculenta (cassava): 110629949
Help
Entry
110629949 CDS
T05761
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO
KO
K16285
RING/U-box domain-containing protein [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110629949
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110629949
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110629949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
zf-RING-like
PgaPase_1
zf-Nse
zf_RING_Vps8
zf-C3H2C3
RINGv
Prok-RING_4
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
110629949
NCBI-ProteinID:
XP_021632863
LinkDB
All DBs
Position
13:3255648..3257017
Genome browser
AA seq
146 aa
AA seq
DB search
MYQLSSMGLSSFPIAAEGVLPLLVMNTVISVALFKNMLRSVLQVMGANWNSQDYEQDDQD
GCVPEENVRKRRISITQFKSLTTHNSGSSSGGRTGSGKVECCVCLSRFEAEEEVSELSCK
HFFHKGCLDKWFDNKHSTCPLCRSVL
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaactttctagcatggggctctcgagtttccctattgctgctgaaggagtgctt
cctctgctggtaatgaacacagttatatcagttgctttattcaagaacatgctaaggtct
gtgctccaagtgatgggtgctaattggaattcacaagattatgagcaagacgatcaagat
gggtgtgttcctgaagaaaatgtgagaaagagaagaatttcaataacccagttcaagtcc
ttgaccacccacaatagtggcagtagcagcggcggtcggactggtagtggtaaagtggag
tgttgtgtgtgtcttagtagatttgaagctgaagaggaggtgagtgaattgtcttgcaag
catttctttcacaaagggtgtctggacaagtggtttgacaataaacatagtacctgtcct
ctttgtagatcagttctctaa
DBGET
integrated database retrieval system
