Manihot esculenta (cassava): 110630005
Help
Entry
110630005 CDS
T05761
Name
(RefSeq) RNA-binding protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110630005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mesc03041
]
110630005
Spliceosome [BR:
mesc03041
]
Complex A
U1 snRNP components
U1 related factors
110630005
Complex B
110630005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
110630005
NCBI-ProteinID:
XP_021632972
LinkDB
All DBs
Position
13:4005877..4014136
Genome browser
AA seq
963 aa
AA seq
DB search
MADPPSSPAATADHNSSKPEPDNPELLPNQPDPTSNSATPPPPPSPLTQQQTPNPNHTLN
PYPALVSTPAHAFPSYAPPISGASVPPLAQSFRPVPQFSPLPNYQNPSVGVQPPGVSAPS
VMASGAPGAVPVPTPVMQYQVPPGQHPNPALRPYAPLPNGYGVIPGAVPQGTMQPPGIQR
YPSPYQAMVRPMFPPRPPGVIGVLPAGSRPLVPGIPAVRPIIPPIIRPAVPSVTPAEKPQ
TTVYVGKIEPTVENDFMLSLLRLCGPVKSWKRAQDPSDGTPKRFGFCEFESAEGVLRALR
LLSKFNIDGQELVLNVNQATREYLERYVEKKTENSKNLKENQAAKIDKEDGTALGVEKNE
PSKSSEEDSNIDKEKGDKESHDLANFGIVTDEDKEADKEALEKLTSMIEERLKTKPLPPP
PPQTPADGSGNTNSELPAKSRDGDSDADIARPDTAEDKNDDETSDNKAASEQDRPETSSP
DRSRKYDRRSRERDRDRDLKREKERELERYEREAERERIRKEREQRRKIEEAEREFEERL
KDWEYREREKEKQRQYEKEKEKERERKRRKEILYDEEGDDDDSRKRWHRSILEEKRRKRL
REKEEDMADRLKEEEEIAEAKSRAEEERLQQQQRDALKLSSDLIMNGSEKKILVEEAIIE
SKDKFVEQVNEGDSGNENRADDEVLQNGAADESTLTPMTESDMRRSGNVPARKLGFGLVG
SGKRATVPSVFHEEDDDEAHKDKKMRPLVPIDYSTEELQAVQPAVTGAQPPNLAAAAEFA
KRISNANPKEERLDVERERSRRTHDRPSQRDRDRNDEDINRVRDEKDKILEQDRNREHGL
DKVKTPDKQKLLDAKQLIDMIPKTKDELFSYEINWAVYDKHGLHERMRPWISKKITEFLG
EEETTLVDYIVSSTQEHVKASQMLDMLQSILDDEAEMFVLKMWRMLIFEIKKVETGLALR
SKT
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccctccgtcttctcctgctgctaccgcagaccacaattctagtaaacccgag
ccagataacccggaacttctgcctaaccaacccgatccaacatccaactctgcaacacca
ccgccacctccgtcaccactgacacagcaacaaacaccaaaccctaaccataccctgaat
ccgtatcctgctttagtatcaactccagcacatgcgtttccatcttacgcgccgccaatt
tccggcgcttctgtgcctcccctggctcagtcgttccgtccggttccgcaattctctccg
ctgccgaattatcaaaatcctagcgttggagtgcagccgcctggggtgagtgcaccgtcg
gttatggcatctggtgcacccggagcggttccggtgccaactccggtgatgcagtatcag
gttccgcccggtcagcatccaaatccggctttgagaccgtacgcgcctttgccgaacggg
tatggggtcattcctggagctgttcctcaaggaactatgcaacctcctggaattcaacga
tatccttctccataccaggctatggttcgccccatgtttcctcctcgtccacctggagtg
attggtgtgcttccagcaggatcccgccctcttgttccagggattcctgctgttcgtcca
attatcccccccatcattaggccagctgttccatctgtcacaccagcagagaaaccacaa
actactgtttatgttggcaagatagaacctactgtggagaatgattttatgctttctctt
cttcggttgtgtggacctgtcaagagttggaaacgtgctcaagaccccagtgatggaact
cctaaacgctttggattttgtgaatttgaatctgctgaaggagttctccgtgcattacgt
ctactgagtaaatttaatattgatgggcaagaactggtgctaaatgttaatcaagcaaca
agagaatatttagagcgctatgttgaaaagaaaactgaaaactccaagaatctcaaagaa
aatcaagctgcaaagattgacaaggaggatggaacagccttaggtgttgaaaagaatgaa
ccttccaaatcctctgaggaggattctaacattgacaaggagaagggggacaaagaaagt
catgatcttgccaactttgggattgtgactgatgaagacaaggaagctgacaaagaagct
ttggagaaacttactagcatgatagaagaaaggttgaagactaaacctttgcctccacca
cctccgcaaacaccagcagatgggtctgggaatacaaactcagaactgccagctaaatcg
agggatggggactctgatgcagatatagcaagaccagacacagctgaagataaaaatgat
gatgagacaagtgacaataaagcagcaagtgaacaggatagacctgaaacaagctcacct
gataggagtagaaagtatgacaggagaagcagagaaagagaccgagaccgagacctaaaa
cgggaaaaggaacgagaacttgaaagatatgaaagggaagcagagcgagagagaattagg
aaagagagggagcagagaaggaagatcgaggaggcagagcgtgagtttgaggagaggctg
aaagattgggaatatagagaaagggagaaagagaaacagcggcagtatgagaaggagaag
gagaaagaaagagaacgcaaaaggaggaaggagattctttatgatgaagaaggtgatgat
gatgattcaagaaaaaggtggcataggagtatcttagaagagaagagaagaaagagacta
agggagaaggaggaagacatggctgacagactcaaagaagaggaggaaattgctgaggct
aagagcagggctgaggaggaaaggttacagcagcaacagagagatgcattaaagctgtcg
tctgatcttatcatgaatggaagtgaaaagaaaattctggtggaggaggccatcattgaa
agcaaagataagtttgttgaacaggttaatgagggagattctggtaatgaaaaccgtgca
gatgatgaggtcttacaaaatggtgctgctgatgagtcaaccttgacaccaatgaccgaa
tcagatatgcggcgaagtggtaatgtgcctgcgagaaagttgggttttggtttagttggg
tctggcaaacgtgctactgttccttcagttttccatgaagaagatgatgatgaggcacac
aaggataaaaagatgaggcctctggttcctattgattattcaacagaggagttgcaggca
gttcaacctgctgttacaggagcacaacccccaaatcttgctgctgctgcagaatttgcg
aaacgcatatctaatgctaatcccaaagaagagaggcttgatgtggaaagagaaagaagc
agacgcactcatgataggccaagtcagagggacagagacaggaacgatgaagatattaat
agggtgagagatgaaaaagataagattcttgaacaggacaggaaccgggaacatgggcta
gacaaagtgaaaacaccagataagcagaaacttttggatgcaaaacagttgattgatatg
atcccaaagaccaaggatgagctattctcatatgagataaattgggccgtttatgacaaa
catgggcttcacgagagaatgagaccatggatttcaaagaagattacggagtttttggga
gaggaggaaaccacactggtagattacattgtatccagtactcaagaacatgttaaggca
tcacaaatgttggatatgcttcagtctatattggatgatgaagctgaaatgtttgtgctc
aagatgtggaggatgcttatcttcgaaattaagaaagtggaaactggtcttgccttgagg
tcgaagacgtaa
DBGET
integrated database retrieval system
