Manihot esculenta (cassava): 110630120
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Entry
110630120 CDS
T05761
Name
(RefSeq) protein CHROMATIN REMODELING 24 isoform X1
KO
K20093
DNA excision repair protein ERCC-6-like [EC:5.6.2.-]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mesc03036
]
110630120
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
110630120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_34
HDA2-3
GCOM2
FlxA
Motif
Other DBs
NCBI-GeneID:
110630120
NCBI-ProteinID:
XP_021633134
LinkDB
All DBs
Position
13:13924464..13949152
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AA seq
1169 aa
AA seq
DB search
MADAKKSSRKPVSLNDSHYRFLYDLSAPPKNPSSFEEEEESMNLGGRRRLCKASATGTQR
GVDDDDDHHQIHMFSGITDFNSSSEEKLTKVKIEGRRRLCKVSSRDKENGGNVAPMLDEP
SVPAITDFNFPFEEKETKVKIEGRRRLCKASSREKENAGRVAPELNEPTFSDITDFDSPL
PSGATTHANSNQAANEIRYILDDLSSRLDLLSIDKKRDIHNVKAADDCSQLVGVGDREKK
VDVPQYASADSSFSGTSYPSDSSSEVNKIVGGCIESVVDDYDEVHMLSKSRADAFLDKLH
RANNYSVGLMENEYERVDDKLEAGGHSYMSNVEKNEENVLSRESQGDNHATREWKTKTST
QGPKKNESKRVQGRLSSARQSYVPILREEEDDDCFVLSGKKVVEEAGRRDSKCKESSDAP
CAIDLLDDYTNDSVLEDESSFSLAGPRSTFELPSKIAKMLYPHQRDGLKWLWSLHYQGKG
GILGDDMGLGKTMQICGFIAGLFHSRLIKRALVVAPKTLLPHWIKELSTVGLSGETREYF
GTSSKARQYELQYILQHEGILLTTYDIVRNNAKSLRGDGYADEESEGGYIWDYMILDEGH
LIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKEMWTLFNFCCPTLLGDYKWFKEHYEH
PILRGNDKSASAREKHIGSAVAKELRERIQPYFLRRLKSEVFKEDDSTTATLSKKNEMIV
WLRLTRCQKQMYEAFLQSELVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLEGMDS
MLNPEDAGVAEKLAKQVADVAERVEFQEKHDNVSCKISFILSLLDDLIPKGHNVLIFSQT
RKMLNLIQESLLSNGYKFLRIDGTTKASDRLKIVNDFQEGFGAPIFLLTSQVGGLGLTLT
KADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVLVYRLMTCGTVEEKIYRKQIFKGGLFK
SATEHKEQIRYFSQQDLRELFSLPKQGFDISLTQQQLHEEHDHQYKMDESLGAHVNFLES
LGIAGVSHHSLLFSKTACVQVVNIEEEEIRRKGNASVGSSSSYSLESNNINGAVHAFNPK
DVKLNKKSSSPDSVGKLTESEIKERISRLSKLLGNKATVSRLPDQGAKLQKQISELNLEL
NQLRMEKTTQNEVIDLDDLTGDLQRVLNV
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgccaagaaaagtagcaggaaaccagtaagcttaaacgatagccattatcgt
tttctctacgacctctctgctcccccgaagaatccatcttctttcgaagaggaagaagag
agtatgaatctcggaggacgacgtcgtctatgcaaagcatcggctactgggacccagcgg
ggcgttgatgatgatgatgatcatcatcaaattcacatgttctctggaattactgatttt
aattcttcatctgaagaaaagctaacaaaggttaagattgaagggagacgtagactttgc
aaagtctcatctcgagacaaggaaaatggtgggaatgttgctcctatgctcgatgaacct
agtgttcctgctattactgattttaattttccttttgaagaaaaggagacaaaggttaag
attgaagggagacgtcgactatgcaaagcctcatctcgggagaaggagaatgctgggaga
gtagctcctgagctcaatgaacctactttttctgatattacagatttcgattcacctctc
ccatctggagctacaactcatgccaacagtaatcaggctgccaatgaaatcaggtatatt
cttgatgatttgagctccaggctggatcttttatcaattgacaaaaagagagacattcac
aatgtcaaggcagctgatgactgttcacaattggttggagttggagatagagagaagaaa
gttgatgtgcctcaatatgcaagtgctgactcctcattttctggtacatcttatccatct
gattcttcatctgaagtgaataagattgttggtggttgcattgagagtgttgtggatgat
tatgatgaggttcatatgttgagcaagtctagagctgatgcttttcttgataagttgcac
agggccaacaattatagcgtagggctaatggagaatgagtatgaaagggtggatgacaaa
ttggaagctgggggacattcctacatgtctaatgttgaaaaaaatgaggaaaatgttttg
agtcgtgagtcccagggtgacaaccatgccactagggagtggaaaactaagacaagtact
caaggaccaaagaaaaatgaatccaaaagggtgcaagggagattaagttctgcaaggcaa
tcttatgtgcctattcttagggaagaagaggatgatgattgcttcgttttgagtggcaaa
aaggtggttgaagaagctgggaggcgtgatagcaagtgcaaggagtcatctgatgccccc
tgtgcaattgatttgttggatgattatacaaatgattcagttttggaggatgaaagctcc
ttttctttggctggtccaagatctacatttgaactaccaagtaaaattgcaaaaatgttg
tatccacatcagcgtgatgggttaaagtggctatggtctttgcactatcagggtaagggt
ggaatcctaggagatgatatgggtctaggtaagacaatgcagatttgtggatttatagct
ggactttttcattcgaggttaattaaaagggcattggtcgtggcccctaaaacactactt
cctcattggatcaaagagctatccactgttgggctttctggagaaactagagaatacttt
gggacctcttccaaagctcgacaatatgagctgcaatatatacttcagcacgaaggcatt
ctccttacaacttatgatattgtgcggaacaatgcaaaatcattaagaggagatggctat
gctgatgaggaaagtgagggtggttacatatgggattacatgattcttgatgagggacat
ctcataaaaaatcctagcacacagagggcaaaaagtttgcttgagataccgagtgctcat
cgtattattattagtggaacaccaattcaaaacaatcttaaggaaatgtggacgttattc
aacttttgttgccccactctgcttggtgactataaatggtttaaagaacactatgaacat
ccaatccttcgcggcaatgataaaagtgcttctgctagggagaagcatattggttcagcc
gttgcaaaggagctaagagaacgcattcaaccttattttttacgtcgattgaagagtgaa
gtatttaaggaagatgattctacaactgctacactttccaaaaagaatgagatgattgtg
tggctaagacttacccgctgtcagaaacaaatgtatgaagcctttttgcaaagtgagctg
gtgttatcagcttttgatggctcaccactggctgcattgacgattctaaaaaaaatatgt
gatcacccacttcttttgacaaaaagagctgctgaagatgtattagaaggaatggattca
atgctaaatccagaggatgctggtgtagcagaaaaattggcaaagcaggttgctgatgta
gctgaaagagttgagtttcaagagaagcatgacaacgtttcatgcaagatatcttttatt
ttgtcactactggatgatttaattccaaaggggcataatgttcttatcttctcccaaaca
cgcaagatgcttaatcttattcaggaatccctgctgtctaatggttacaaattcttacgc
attgatggcaccactaaagctagtgacagattgaagattgttaatgatttccaagaaggt
tttggggcccctatatttctcctcacatctcaagttggtggtcttggccttacacttaca
aaagctgaccgtgtcattgtggttgatcctgcatggaatccaagcacggataaccaaagt
gttgatcgtgcatatcgaattggccagaagaaagatgtccttgtgtatagattaatgaca
tgtggaactgttgaagaaaagatatacagaaagcagatattcaagggaggattgtttaaa
agcgcaactgaacacaaggaacagattcggtactttagccagcaggaccttcgggaacta
ttcagcctcccaaagcaggggtttgatatttccctcacacaacagcaattacatgaagag
catgaccaccagtacaagatggatgaatccctgggagcccatgtgaacttcctggagagt
ctaggcatagcaggggttagtcaccacagtttgctattctccaaaacggcctgcgtacaa
gttgtaaacatagaagaggaagagataaggagaaaaggaaatgcatctgttggaagttca
tcaagttattcacttgagagcaataatattaatggggctgtgcatgctttcaatccgaag
gatgtaaaactaaacaagaaaagctcttctccagatagtgttggcaaactgacggaatct
gaaatcaaagagagaatcagtcgtttgtcaaaattacttgggaataaggctacagtttca
agattaccagaccaaggagcgaaattgcaaaagcagatttcggaattgaacttagagctc
aaccaactcaggatggaaaaaacaactcagaatgaagttatcgatctggatgatcttact
ggggaccttcaacgagtgttgaatgtatag
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