KEGG   Manihot esculenta (cassava): 110630125
Entry
110630125         CDS       T05761                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RMA1H1
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110630125
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mesc04121]
    110630125
Enzymes [BR:mesc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110630125
Ubiquitin system [BR:mesc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    110630125
SSDB
Motif
Pfam: zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 RING_XB3-XBAT31 zf-RING_2 zf-RING_5 zf-C3HC4_3 zf-C3HC4_4 Prok-RING_4 zf-rbx1 zf-RING_11
Other DBs
NCBI-GeneID: 110630125
NCBI-ProteinID: XP_021633142
LinkDB
Position
13:36325841..36328979
AA seq 264 aa
MATEQYIEESVENDYIREDKSPLNTCKSSDNVGDSDDSPCNGFDCNICLDSVQDPVVTLC
GHLYCWPCIYKWLHFQNISAENDMQIQQQCPVCKAEVSEGTLVPLFGRGQPTKPSKSKAP
NLGIIIPRRPLGLACGFDSPRSPSTPSSVRSRATQQIYNGDYSPHPSQLYYSQPGGMSYP
ASSMLTPRVATTNMYDPMIGMFGEMIYARVFGNSITNIYSYPNSYNLAGSTSPRMRRHIL
QADMSLSRICFFLFCCVFLCFLSF
NT seq 795 nt   +upstreamnt  +downstreamnt
atggccacagagcagtatattgaagaatcagttgaaaatgattatatcagagaggataaa
tctccactaaatacttgcaaatcttctgacaacgttggagattccgatgatagcccttgt
aatggattcgattgcaatatttgcctggattctgtgcaggatcctgtggtgacactttgt
ggtcacctttattgctggccttgcatatacaagtggctccatttccagaacatctctgca
gaaaacgatatgcagatacagcagcaatgtcctgtatgcaaggctgaagtttctgaaggc
accctggttccactcttcggacgtggccaacctacaaaaccttctaaaagcaaagccccc
aatctgggaataatcattccaagaagacctcttggtcttgcatgcggatttgattcaccg
agatcaccttcgactccaagcagtgtccgatcacgagcaacccagcaaatttacaatggt
gattattcacctcatccttctcaattatactactctcagccaggaggaatgagctaccct
gcatcttcaatgcttactccacgagttgcaacaacaaatatgtacgatccaatgattgga
atgtttggggaaatgatctatgcaagggtctttggtaactccataaccaatatatacagc
tacccaaattcatataatcttgcaggaagcaccagccctagaatgagaaggcacattttg
caggctgatatgtcgcttagcagaatctgttttttcctcttctgttgtgtatttttgtgt
ttcctctcattttga

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