Manihot esculenta (cassava): 110630152
Help
Entry
110630152 CDS
T05761
Name
(RefSeq) heat shock factor protein HSF24
KO
K09419
heat shock transcription factor, other eukaryote
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110630152
Transcription factors [BR:
mesc03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
110630152
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSF_DNA-bind
bZIP_1
SH3-A_UBE2O
CC_Bre1
CCDC18_1st
DUF8429
Cep57_CLD_2
USHBP1_PDZ-bd
ZapB
ADIP
XRCC4_CC
TolA_bind_tri
CCDC22_CC
Geminin
HAP1_N
FAZ1_C
Motif
Other DBs
NCBI-GeneID:
110630152
NCBI-ProteinID:
XP_021633190
LinkDB
All DBs
Position
13:33220158..33222954
Genome browser
AA seq
289 aa
AA seq
DB search
MAQRSVPAPFLTKTYQLVDDPSTDDVISWNETGTTFVVWKTADFARDLLPNYFKHNNFSS
FVRQLNTYGFRKIVPDKWEFANENFRRGHKELLSEIRRRKTVNPTATQTPVACKSGAGGG
LTTSLSNSGEDLGSTSTSSQDSKNPGSVETAATMTTQFADLSGENKKLKKDNEMLSSELA
QAKKQCDELIAFLTEYVKVGPDQINRIMRQGSCCGSTLDGLVSGITAGTDDHNDDDDDDK
NGRNDDGEDAGGSGESFKLFGVLVKGNTKKRGRAENLGFSRPHAKEIKI
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcggtcagttccggcgccgtttttgacgaaaacgtatcagttggtggatgat
ccgagcacggacgatgtgatttcctggaatgaaacaggaacaacttttgtggtctggaaa
actgcagattttgccagagatttgcttcctaattacttcaagcacaacaacttctctagc
tttgttcgccaactcaatacctacggctttcgaaagatcgtgcctgacaaatgggaattc
gccaacgagaattttcgtcgaggacacaaggagctcctctccgaaatacgacgccggaaa
actgtaaatcctacggcaactcagactccggtcgcctgtaagtccggagcaggaggagga
ttaactacctccctatccaattccggtgaagatttgggttccacttctacgtcctctcag
gattcgaagaatccgggatcagtggagacggcagcgaccatgacaacgcaatttgccgac
ttatcgggtgagaacaagaagttgaagaaggacaacgagatgctgagctcggagctggcg
caagctaagaaacagtgcgacgagttgattgctttcttaaccgagtatgtgaaagtggga
cccgatcaaatcaatcgcatcatgcggcaaggaagctgctgtgggtccacccttgatgga
ttggtgagtggaatcaccgccgggactgatgatcacaatgatgatgacgacgacgacaaa
aatggtaggaacgacgacggtgaagatgctggtggaagcggcgagagttttaaactattt
ggggttttggtgaaggggaacacgaaaaagcggggtcgcgctgagaatcttggattttct
cggccccacgcaaaggaaatcaagatctaa
DBGET
integrated database retrieval system
