Manihot esculenta (cassava): 110630376
Help
Entry
110630376 CDS
T05761
Name
(RefSeq) two-component response regulator ARR11 isoform X1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110630376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110630376
Transcription factors [BR:
mesc03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
110630376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
CBF_beta
Motif
Other DBs
NCBI-GeneID:
110630376
NCBI-ProteinID:
XP_021633533
LinkDB
All DBs
Position
13:complement(1993689..1998154)
Genome browser
AA seq
583 aa
AA seq
DB search
MMDNGFSSPRHDPFPAGLRVLVVDDDLTWLKILEKMLKKCSYEVTTCGLAIDALHLLRER
KDRYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSQVMKGVQHGACDYLLKP
IRMKELRNIWQHVLRKKIHEVRDIEILEGMESIQMTRNGLDQSSDGHLLCGEDLTSVKKR
KEAENKHDDKDPGDSSSTKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLT
RENVASHLQKYRLYLSRLQKENDTKTSVGGGKHSDSPSRDSAGSFGIQNSINIQRNDISN
GSYGFSGNSLIVRNVEPRSQENERKGIVSKTAVEPKRALAVEVPDPCKPKSSEMEFGHSF
TSPASEVNFAEFGSNFPTKFSWCAIPQSQLKQEQNPLHLDAGFSQRTRPGKQQHIQVDYP
QPSPPIISGSSVTERNMDGSVKIKPIYDECRNNGSQVSSARSTMDSYQVQTKTYEVNHQA
YEPISTNTSSLKNQAAFNLSSISDLESAQKSINWAMSPLATLDDDFQVRWVQGDCYAMNL
GLQNIEFPEYFDGGLLADVPTHLYENLYDSTECSVIEQGLFIA
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgatggacaatgggttctcttcccctcgacacgacccttttcctgctggtctccgtgtt
cttgttgtcgatgacgatctcacctggttgaaaattcttgaaaagatgctcaagaagtgc
tcttacgaagtgacgacttgtggtttagcaatagatgctctgcacttgcttcgtgagagg
aaagatcgatatgacatcgtaatcagtgatgtcaacatgcctgacatggatggttttaaa
cttctagaacatgttggactggagatggatctacctgtcattatgatgtctgttgatgga
gaaacaagtcaggttatgaaaggcgttcagcatggagcctgtgattatcttcttaagcca
atacgaatgaaagaacttcgaaacatatggcagcatgtattgagaaagaagatccacgag
gtaagagacattgaaattcttgaaggaatggaaagtatacaaatgactagaaatggatta
gatcagtccagtgatggtcacttgctttgtggagaagatctgacttctgtcaagaaaaga
aaagaggctgaaaacaagcatgacgacaaagaccctggtgacagttcttccacaaagaaa
gccagagtagtttggtcagtagacctccatcagaaatttgtcaaagctgtaaatcagata
ggatttgataaagttggtccaaagaaaatccttgacttgatgaacgtgccatggttgaca
agggaaaatgttgcaagccacttgcagaaataccgcctctatttgagtagattgcagaag
gaaaatgacacaaaaacttctgttggtgggggaaagcattcagactcaccttcaagagat
tctgctggtagttttggtattcagaactctatcaacatccaacggaatgatatttcaaac
ggtagctatggattttcaggtaatagtttaattgtccgaaatgtggagcctagaagccag
gaaaatgagcgaaagggaattgtttcaaagactgctgtggaacccaaaagagctttagct
gttgaagttcctgatccttgtaagcccaagagttcagaaatggaatttggtcattctttt
acatctccagcatcagaggtaaactttgcagaatttggttcaaacttcccaactaagttt
tcatggtgtgcaattccacaaagtcaactgaagcaagaacagaacccactccatttagat
gctgggtttagccagcgaacacgacccggaaaacagcagcacattcaagttgattatcca
caaccatctccacccattatttccggatcttctgtaactgaaagaaacatggatggctct
gttaaaattaaacctatatatgatgagtgcaggaacaatggtagccaagtgagttcagca
aggagcacaatggactcttaccaggttcaaaccaagacctatgaggtgaatcatcaagct
tatgagcccatttcaaccaacacatcaagcctgaaaaatcaggctgctttcaatctgagt
agcatatcagacttggaatcagcccaaaagagtataaattgggcaatgtcacctttggca
acattggatgatgattttcaagtccgctgggttcaaggtgattgttatgctatgaatctt
ggactgcagaacatcgagtttccagagtattttgacggggggctcctcgctgatgttcca
acacacctctacgagaatctctatgactcaacagaatgttctgtaatagagcaaggtttg
tttatagcataa
DBGET
integrated database retrieval system
