Manihot esculenta (cassava): 110630512
Help
Entry
110630512 CDS
T05761
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00040
Pentose and glucuronate interconversions
mesc01100
Metabolic pathways
Module
mesc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110630512
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110630512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
DUF1455
Motif
Other DBs
NCBI-GeneID:
110630512
NCBI-ProteinID:
XP_021633730
LinkDB
All DBs
Position
1:complement(4509487..4511151)
Genome browser
AA seq
392 aa
AA seq
DB search
MAKDHISSLLAAVLTMFYTISLATAARYSVLNYGAMSDGRTDSTKAFLAAWTQACGSTKP
TTLYVPRGKFLLRNVVFNGPCKNNAILVFIAGTLVAPSDYRVIGNAENWISFQYVNGVTV
SGGVLDGQGPGLWACKNSGKNCPGGATSLRFSNSDNIVVSGLTSLNSQLYHVVFNGCNNV
KVQGVTLSASGNSPNTDGIHVQLSSGVTILNSRIRTGDDCVSIGAGTANLRIENVACGPG
HGISIGSLGKDLQEPGVENVTVKTVTITGTQNGLRIKTWGRPSSGFVRNVLFQHVIMNNV
QNPIVIDQNYCPDNENCPGQDSGVKISDVTYQDVHGTSATKVAVRFDCSKKKPCTGIKME
DVKLTYKNLPADASCKNADGTAFGVIQPSSCL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagatcacatctcttctttactggctgcagttttgaccatgttctataccatt
tctttagcaactgcagcaagatacagcgtgctgaattatggggctatgtctgatggaaga
actgactcaaccaaagcctttcttgctgcttggacacaagcttgtggatcaactaagcca
accaccttgtatgtgccacgagggaagttccttctgcgaaacgtagtgtttaacggtcca
tgcaagaacaatgcaatcttagttttcatagctggtacccttgtggctccttcagattat
cgagttattggtaatgcagaaaactggatttcctttcagtacgtcaatggtgttacagtt
tcaggtggagttctcgatgggcaaggtcctggtttatgggcttgcaagaactccggcaag
aactgccccggtggtgccacgtcgctgcggttttccaattcagataacatagtggtcagt
ggattaacatcactgaatagccaattgtaccacgttgtcttcaatggctgcaacaacgtg
aaagtgcaaggtgtgacgttgtctgcatccggcaacagccccaacaccgatgggattcat
gtacaattatcaagtggggttacaatccttaactccaggattagaactggtgatgattgt
gtctcaatcggcgccggaactgctaacttgcggattgaaaacgtagcttgtggccctggc
catggaatcagtattgggagcttgggaaaggatcttcaagagcctggtgtagagaatgtg
acagttaaaaccgttacaattacaggtacacagaatgggttgagaatcaagacttggggg
agacctagcagtgggttcgtgaggaacgtacttttccaacatgtcatcatgaacaatgtt
cagaatcccatcgtcattgatcaaaattattgtccggataacgaaaattgtcctggtcag
gattctggagttaaaattagtgacgtgacatatcaagacgtacatggaacatcagcaact
aaagtagcagtgagatttgattgcagtaagaagaagccatgcactggaatcaaaatggaa
gatgtgaagctgacttacaagaatctgccagctgatgcatcttgtaagaatgcagatgga
acagcttttggtgtcattcagccctccagttgtctgtaa
DBGET
integrated database retrieval system
