Manihot esculenta (cassava): 110630525
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Entry
110630525 CDS
T05761
Name
(RefSeq) axial regulator YABBY 4 isoform X1
KO
K25796
plant-specific transcription factor YABBY family protein
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110630525
Transcription factors [BR:
mesc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Yabby
110630525
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YABBY
YABBY_N
Ccdc124
HMG_box
HMG_box_2
EDR4-like_1st
Zn_ribbon_Com
Motif
Other DBs
NCBI-GeneID:
110630525
NCBI-ProteinID:
XP_021633748
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All DBs
Position
13:3728448..3730514
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AA seq
219 aa
AA seq
DB search
MATLSHLFDLPEQICYVQCGFCNTILLVSVPCSSLSMVVTVRCGHCTSLLSVNMMKVSFV
PFQFLASLSHDHQQKDVGPEEADTPKALDLQRSSSMMAYSDNELEEDKNLVNRVINKPAP
EKRQRAPSAYNRFINREEIRRLKAENPSMAHKEAFSTAAKNWASFPPVHYKEGGDGGDQE
EDKATWSCDATEFQDNTEGNGFHERKVPRHSIWPRTPFK
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggcgacattgagccatctctttgaccttccagagcagatttgctacgtgcagtgtggt
ttctgcaacaccatcttactggtaagtgtcccatgcagcagcctgtcaatggtggtgact
gtgagatgtgggcactgcaccagcctcctttctgtcaacatgatgaaagtttcttttgta
cctttccagtttttagcttctctcagccatgatcatcagcaaaaagatgtcggtccagaa
gaagctgataccccaaaagccttagaccttcagagatcatcatccatgatggcctattct
gataacgaattagaggaggataagaatcttgtcaatcgtgtcattaataaaccagcacca
gagaaaaggcagagagcaccatcagcttacaaccgcttcatcaacagagaagagatccga
aggctcaaagctgaaaatccaagcatggctcacaaagaagccttcagtacagctgcaaaa
aattgggccagtttccccccagttcattataaagaaggtggagatggtggtgaccaagaa
gaggataaggcaacatggagttgtgatgcaactgagtttcaggacaacactgaaggcaat
ggtttccatgaaagaaaggtcccaaggcattccatatggccaaggacacccttcaagtga
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