Manihot esculenta (cassava): 110630678
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Entry
110630678 CDS
T05761
Name
(RefSeq) uncharacterized protein LOC110630678
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110630678
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
110630678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
At2g31720-like
B3
Motif
Other DBs
NCBI-GeneID:
110630678
NCBI-ProteinID:
XP_043806307
LinkDB
All DBs
Position
14:complement(1722768..1733777)
Genome browser
AA seq
1529 aa
AA seq
DB search
MPRSSRHKSSKHISRDARDYSDSEKDSSSKDRKSKEESAVRHSKESGSGEKRKLESKDNK
DSFGSGNGEYLEEYSSSKRVKERLEDSVNDRWNGGDDDRGEGTKKLKEKPGESRSKRRDE
SAGAYGEIEEVVKKSSGKSDGKHRESSSRKEGREGGTERERDREREREKERERKSKEGKS
DKLVDVEDLRSVKQVSEKTELNAHDLLQNSEMDSLPDLRIRRKRDGFSDGDKHQDDIGDT
KDRRLSSREDVAKDGRPKDEKHKDERYRDKYCEDLDREIRHRDDKQRDERAAKDRMNSRS
DDKNLKDDKDTIDFKRKKYKLQDGDRDHEREHDRDYDHDIDVESNHHDRDRDRDRDRDRD
QDRERDRDWDRDHDRDWDRDRDRERDRERGRDRDRNLDYDDRIAARYKESRRRKISPDDH
EDYSDTKSRGVKTLCVDMEKKSSSNSRVESDADRGRSQSLQGHPDNNTSSNRRRVSPNTS
SHGVVDDYRQIKQEELKHRDGLIEQRSKSISSREVINLAGASDRASKYRSAEKSTKIDDG
HIGELSLERSSSSKASPMGMMDRSPSSMSLERRYMNRSGVRRSLDIEESGKRSSGSMGAR
DLPYADERSSRDILLEKSLADELTSVDSSFYGRNSQSNSALVPPPSAFRGGVGSPSFLSS
LEEDSRTNSGARYKRSADPNKGRGQGNPWRGTPNWSSPMPNGYIPFQHGPPHGGFQAMMP
QFPSPPLFGVRPSMEINHSGIPYHIPDADRFSNHLRPLGWQNMMDGSGPSHFHGWDRNNG
VFRDESHIYGGTEWDKNRHPMNGRGWENSADIWKGQNGDVNMDLPSTSLKEHYPLQAPVE
DVPAGQEGQRSQNEGDYHGVLAKIVETKTAVSPSAKGSSKPSPKITHEKKPDHPKLPSDD
NGSHVYRAYLSKLDISTELTDPELHNQFMSLFNIEQSATADEDAAMLVNLKDGARAVPKS
SYTLLSSSHFPSASDAVFLKAMDIYKRQKVGLSLSMANGGTIDAIPTSKMGELAPSNDVD
IAEEPVLDHIAEMSDVQMLNLDGEQVEVHASVANEEENSEVAGSAEVDVMAHSPNLKLES
VSQALSNDIPEKQPMIIFSDGKVDGMSGLVNAEDKQGDIVSAPDDVPNADLVLATTDGQN
KDENGEIEGSDTFNCGEGGQGVRDGICGRVLYSDGSPKAYGALMPGSNESESVILSRIHH
SPESTHPMASPSSSVQALGGSGSELLTFEDMESHNVDVNKQVTKFECLLIVGAVATVKWE
EQKRNKAVEMDKLPRLLRGKPLKKQAVFLVGEKGFSNKAREFKGEKLLDVASKKKDLHQW
RFNIETEQELNQKKNEARKATAPKRRNKDENCNALLENQERRKRHRKTSSKSENGDLKSS
TSLPQPSLPQKFKKLILEMKGTEAKLVIQKAITNTDTQDNQGRLSMPKKQVLCEFLNEDE
KEKLEKDKHLQVKIIDPNLEVSDMNFRQWKLSKPNGSPSLTYVFRTHWNEFKKKNGLKED
DIIQVWCFRVVGKILFALVKVEEGCENGQ
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgaagttcacgccataaatcgagcaaacatatttcgagagatgcaagggattac
tcagattctgagaaggactcaagctccaaggaccgaaagagcaaagaggagagtgctgtg
aggcattctaaagagtctggttctggtgaaaagcgaaagctcgagtctaaagacaataaa
gactcgtttggctctggaaatggggagtacttagaggaatattcgtcatcaaaacgggtt
aaggagagacttgaggacagcgtgaatgataggtggaatggcggggatgatgatagaggg
gaggggacaaagaagttgaaggagaagccgggtgaatccaggagtaagagaagagatgag
agtgctggagcgtatggtgagattgaggaggtggtgaaaaagagcagtggaaagagtgat
ggaaagcatagggaatcaagtagtcgaaaggagggaagagaaggtggaactgagagggag
agagacagagagagggaaagggaaaaggagagggagaggaagagtaaggaggggaagagt
gacaaattggttgatgttgaagatctgcgttcagtgaagcaagtatctgaaaaaaccgag
ttgaatgcacatgatctgctgcaaaattctgaaatggacagcctgcccgatctacggata
aggagaaaacgagatggttttagtgacggggataagcatcaggatgatattggagacacc
aaagacagacgattgtcctcaagggaggatgttgccaaggatggaaggccaaaggatgag
aagcataaggatgagagatatagagacaagtactgtgaagatttggacagggaaatcagg
catcgagatgacaagcaaagagatgagcgtgctgcaaaagatcgcatgaacagcaggtct
gatgataagaacttgaaggatgataaagataccatagattttaaacgaaaaaaatataaa
cttcaagatggtgatcgtgaccatgagcgagagcatgatcgtgattatgatcatgatatt
gatgttgaaagtaatcatcatgatcgggatagagatagagatcgggaccgtgatagagat
caagaccgggagcgtgaccgggattgggatcgggatcatgatcgtgattgggatcgggat
agagaccgggaacgtgatcgagagcgtggccgtgaccgtgacagaaatctggactatgat
gatcgaattgcagcaagatacaaagagagcaggagaaggaagatatctcctgatgatcat
gaggattatagtgatactaaatctaggggtgtcaaaaccctttgtgttgacatggaaaag
aaatcatcaagcaacagtagagttgagtctgatgctgacaggggaaggtctcaatcactt
caaggtcacccagacaacaataccagcagcaataggaggagggtttcccccaacaccagt
tctcatggggttgtagatgattacaggcaaattaaacaggaagaactaaagcacagggat
ggcttgatagaacaaaggtctaaatcaatttcttctagagaggttattaatttggcagga
gcatcagatagagcttccaagtacagatctgccgagaagtctactaaaatagatgatggc
catattggggagctgtctttagaaagatcttctagttctaaagcttcccctatgggcatg
atggatagatctccttcatcaatgagtctggagcgcagatacatgaataggtctggtgtt
agacggagtcttgacatagaagaatcagggaagaggagcagtggttccatgggtgcaaga
gatttgccttatgctgatgagaggtctagccgtgatatacttttggagaagtctctagct
gatgagttaacttcagtcgattcatccttttacggtagaaatagccaaagtaactctgct
ttggttcctccaccatctgctttcaggggtggagttggcagcccttcctttttgagttcc
ctggaagaagatagtagaactaacagtggtgcccgctacaagaggagtgctgatcccaat
aagggaagagggcaaggaaatccttggagaggtactccgaactggtcttcgcctatgcca
aatggctatattcctttccaacatgggccgcctcatggaggttttcaagccatgatgcca
cagtttccatccccccctctatttggagtcagaccctcaatggaaatcaaccactctggg
attccttatcatattcctgatgctgacaggttttccaatcatctccgccctcttggatgg
cagaatatgatggatgggtcagggccttctcactttcacggatgggatagaaataatggt
gtatttagggatgaatcacacatatatgggggaacagaatgggacaagaacaggcatcca
atgaatggtcgagggtgggaaaatagtgctgacatttggaagggacaaaatggtgatgta
aatatggatttgccctcaacatctttgaaagagcattatccactgcaggcccctgtggag
gatgttccagctggccaggaaggtcaaaggtcacaaaatgaaggtgattatcatggggtt
ctggcaaagattgttgaaacaaagacagctgtttctccttcagccaaaggatcttctaaa
ccttcacctaaaattacccatgagaagaaacctgatcatcctaaattaccaagtgatgat
aatggttctcatgtttaccgtgcttatctttccaagctggacatttcaactgaacttact
gatccagagttgcataatcagtttatgagcttgtttaatatagaacagagtgctactgct
gatgaagacgctgcgatgcttgtaaatttgaaggatggtgcaagagcagtaccaaaaagt
tcttataccttgttgagctcctcacattttccctctgcaagtgatgctgtttttctgaaa
gcaatggacatttataagaggcaaaaagtaggtttgagcttgtcaatggctaatggtgga
acaatagatgccattccgacctccaaaatgggggagctcgcaccttcaaatgatgtggac
atagcagaagagccagttttagatcatattgcagaaatgtctgacgtgcagatgttgaat
ttagacggggagcaagttgaagttcatgcttcagttgctaatgaggaagagaattcagaa
gtggctggcagtgcggaggtggatgttatggctcattcccctaacctgaagttggaatcg
gtcagtcaagctcttagtaatgatatcccagaaaagcagcccatgattattttcagtgat
ggtaaggtagatgggatgtcgggactggtgaatgcagaagataagcaaggagatattgtg
tcggctcctgatgatgtgcctaatgctgacctagttctagctactactgatgggcaaaac
aaggacgagaatggcgagatcgaaggtagtgatacttttaattgtggtgaagggggacag
ggtgttagagatggaatatgtggtcgtgtattatattcggatggttctcccaaggcatat
ggggctttgatgcctgggtcaaatgagtcggagtcggtaattttaagtcggatacatcat
tctcctgaaagtacacatcccatggcttccccttcttcatcagtccaagctttgggaggc
tctgggtctgagcttttaacttttgaggacatggagtctcataacgttgatgtcaataag
caggtgacgaagtttgaatgtttgttgatagttggagcagttgctactgtcaagtgggag
gaacaaaagagaaacaaagctgtggagatggataagctacctaggcttttaaggggaaag
cctttgaaaaagcaagcagtttttcttgttggagaaaaggggttcagcaacaaagccaga
gagttcaagggagaaaaattactggatgttgcaagcaagaagaaggatcttcatcaatgg
cggttcaacattgagactgagcaagaactgaatcaaaagaagaatgaggcaagaaaagct
actgcaccaaagagaagaaacaaagatgagaactgcaatgcgttacttgagaatcaagaa
aggagaaaaaggcacagaaagacaagctcaaaaagcgagaatggagatttgaagagttca
acgtcattgccacaaccaagcctacctcaaaaattcaagaaactgatcctcgagatgaag
ggtactgaagcaaagttggtgatccagaaggcaataacaaacacggacacgcaagacaat
caggggcgtttatcaatgccgaagaagcaagtgttatgtgaattcttgaatgaagatgag
aaggaaaagctagagaaagataaacacttgcaagtgaagatcattgatcctaatcttgaa
gttagtgacatgaatttcaggcaatggaagctgagcaaacccaatgggagtccttcttta
acctatgtgtttcgcactcactggaatgagtttaagaagaagaatgggttaaaagaagat
gatataattcaagtatggtgttttagagttgttgggaagattttgttcgctttggtgaag
gttgaagaaggatgtgaaaatggacaatga
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integrated database retrieval system
