Manihot esculenta (cassava): 110630774
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Entry
110630774 CDS
T05761
Name
(RefSeq) nuclear pore complex protein NUP43
KO
K14305
nuclear pore complex protein Nup43
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110630774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110630774
03036 Chromosome and associated proteins [BR:
mesc03036
]
110630774
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110630774
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110630774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
110630774
NCBI-ProteinID:
XP_021634039
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Position
14:complement(14141441..14146003)
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AA seq
355 aa
AA seq
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MEITGLPQPPQVHRIPQFRYVDSIRWLPSISPFQKSLIVAFFDTDTSTPSLEIHSLSPSK
TLSLLSCWNPPSRISSLKCTPSLIAASTFSGSLYCFSTAGKSLESVVAEPQVSVVGRDFH
VGPIGGVDLMEGGSDCVSVGEDGRVNLVKLGFEGYHGKGNCRRVFDGNGLVSYTAVRWAS
PTEFVTGGCGFGLQWWDLRRPGSAVAQFKGNWDQGTTSGIIHSIDIHPSRKHTCLAGGSS
GTVFAWDLRWQQEPIILSGVGTNENKTHSLSESDVWEVQYDSYIKSSSSSISSSRILPAM
ICSEDGILAVIEQGEEPLELLAEPCAINSFDIDRQNPSDVVCSLEWESIAILSRP
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggagataactggacttcctcaacccccacaagtccacagaatccctcaattcagatat
gtagactcaatccgctggcttccttctatctccccatttcagaaatctctcattgtcgct
ttcttcgatactgacaccagcactccgtccctcgaaattcactctctaagcccctcaaaa
accctctctctactctcctgctggaacccaccttcccgcatctcctccctcaagtgcacc
ccttctcttatcgccgcttccacattttccggctctctctactgcttctccaccgccggc
aaaagccttgagtctgtggttgcggagccgcaggtctcggtggtaggtagggactttcat
gtggggccgattgggggagtggatctaatggagggcgggagtgattgtgtgagtgttggg
gaagatgggagggtgaatttagttaagcttggatttgaaggttatcatggaaaggggaat
tgcaggagggtttttgatgggaatgggttagtttcatatacagctgtgaggtgggcttcg
ccaactgagtttgtgaccggtggatgtgggtttgggctgcaatggtgggacctaagacgg
cctggttctgctgttgctcagttcaagggtaattgggatcagggaacaacttctgggatc
atacactccattgatattcatccatcaagaaaacacacatgtctggcaggaggttcttca
ggtactgtatttgcctgggacctacgctggcaacaagaaccaattattctttctggggtt
ggtacaaatgagaataagacccattcattatctgaaagtgatgtttgggaggttcaatac
gacagctacataaagtcttccagcagcagtatctcatcctcacggatcttacctgcaatg
atctgttcggaagatgggatccttgctgttattgaacaaggtgaggaacctctcgaactc
ttggctgaaccatgcgcaatcaacagctttgacattgaccgtcaaaatccctcggatgtg
gtatgtagtttggagtgggagtcgatagccatattgtcgagaccataa
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