Manihot esculenta (cassava): 110630971
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Entry
110630971 CDS
T05761
Name
(RefSeq) truncated transcription factor CAULIFLOWER A isoform X1
KO
K09264
MADS-box transcription factor, plant
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110630971
Transcription factors [BR:
mesc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
110630971
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
K-box
SRF-TF
Med4
Herpes_UL6
DUF4407
FliD_C
Spectrin_Anc-1_2
PP2C
HlyD_2
DUF3783
Motif
Other DBs
NCBI-GeneID:
110630971
NCBI-ProteinID:
XP_021634330
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Position
14:7318289..7333460
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AA seq
237 aa
AA seq
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MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIIFSTKGKLFEYSTD
SCSMERILERYERYSYAERQLVATDTETNGSWTLEYAKLKARMEVLQRNQRHFMGADLDN
LSLKELQSLEQQIDSALKHIRSRKNQMMHESISELQKKDKALQDQNNQLAKKVKEKEKEM
AQQTQKEQQNLGADSSTVLLPPQSFILRGNGGEDETTPIQDRGNAVLPAWMLSHLNE
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggggagaggtagagttcagctcaagagaattgagaacaagatcaataggcaagtgacc
ttttccaagagaaggtctggcttgttgaagaaagcccatgagatctctgtgctttgcgat
gctgaggttgctttgatcatcttctccactaaagggaagctctttgaatactctacggat
tcctgcagcatggaaaggatccttgaacgttatgagagatattcatatgcagagcggcag
cttgttgcaactgataccgaaacaaatggtagctggactctcgaatatgcgaagttgaag
gctaggatggaggttttacaaaggaaccaaaggcatttcatgggggcagatcttgataac
ttaagcctcaaagagcttcagagtttggagcaacaaattgattctgctcttaaacacata
aggtcaagaaagaaccaaatgatgcatgaatctatttcagaactgcagaagaaggacaag
gcattacaggaccaaaacaaccagcttgcaaagaaggttaaggagaaagagaaggaaatg
gctcagcagacacaaaaggagcaacaaaatcttggtgcagattcatctactgttcttcta
ccaccgcagtccttcatcctaagaggcaatggaggggaggatgaaacaactccaatccaa
gatcgaggcaatgcagttctgcctgcttggatgctttcccacctgaacgagtaa
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