Manihot esculenta (cassava): 110630972
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Entry
110630972 CDS
T05761
Name
(RefSeq) ATP-dependent DNA helicase SRS2-like protein At4g25120 isoform X1
Organism
mesc
Manihot esculenta (cassava)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_12
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-GeneID:
110630972
NCBI-ProteinID:
XP_021634332
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Position
14:complement(3458751..3469231)
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AA seq
1152 aa
AA seq
DB search
MPKENGYAPSKVITEEQRARISQNFRAAKALLSRKRPRDSPSTSPLFPLKDAKCTASPSP
DQVTSIKRVPLVEMQMNTPSPIRANGIESTGSKVRSDLCSSMAGFVPRNGLINNISSSRA
MSISLGDKCSLDCFTTPIKYPECLCLSDYLSKPSILDDDFDESILNEIDAICEQNSAAKV
EIQSSNSSLLEENKYKEENIGCNFASSVSVSADDDMRTRVAFESSGDLVSRKEEKDTSQL
IEHGNMPEEYSKYLQSLNNRQREAACSDISVPLMIVAGPGSGKTSTMVGRVLMLLSEGIS
PTNILAMTFTTAAASEMRDRIGAVAGKAIAKELMISTFHSFSLQLCRSYAEKLGRTPEFL
IYGQGHQRRAIIEAMRLLEKQKTAIQNIDEASNGITSPEHFKDKSKKWQRFVTKAKASGK
TPADCNKMGDVIGASILGNYNDILRSCDALDYHDLISCSVKLLTDYPDVFEECQNSWKAI
VIDEFQDTSAMQYNLLRLLASHSQITIVGDDDQSIFSFNGADISGFNSFRLDFPNYKEIR
LNKNYRSTRHIVEAASFLIQNNMKRCQFKEVVTDNSSGSKIIIKECHNEHAQCSFVVDKT
LEIASNGSPDKPSYGSIAVLYRRQASGKAFQVAFRDRKIPFNVHGVAFYRKKVVKAIIAM
LRTTLPGCDDGPYRQVFKAMLPFEKDEKKRVIDHIDKILTIRKCSFISVANDVFSAKLSG
TFNRSQLSQGRKVLLTLEMISKLVQREQSISAVITSVANMVPQKYLLEQRAVVDVDGGKL
LNEENDLRSVLQYLLDDVSDFLSMQCAKKGEAGDVKEEEKGCLRLLKAFIDYITEREKEN
FRSRRHDNENSVTLTTIHQSKGLEWDIVFIVKVNESEIPLLHESNGTTKENGTSIEEERR
LLYVAMTRARKKLFILYVMMDSNWQMLQPSRFLKEIPDHLREIQAEVCLRDLQTKPQDIP
KQPVNITTNLPGEKNSSEVDMEPNDSLNIQINNASKEITEPVDACNGNIFLKRFSVEDRS
VVSHLFHKWAKKQAFQNPKRLLDKVGFVIDERLRIKKSKHKDVLHALKPCLSSEEAFQYA
EYVLRWEQIPADERAHLMREKQEYFQKLRIENSMSTSAPTAKQIGFLQNLGCTVVPISRL
HASRLIEQYKSL
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaggaaaatggttacgcccccagcaaagttatcacggaggagcagagggctcgc
atttcacagaacttcagagctgcgaaggccctcctttctcgcaaacggccccgtgattcc
ccctctacttcccctctatttcctctcaaggatgcgaagtgtaccgcatcgccatcgcca
gatcaggttactagcatcaaaagagttcctctagtagagatgcaaatgaacacgccatcc
ccgattcgtgctaatggaattgaatcaaccggtagtaaagttaggagtgatttatgttcc
agtatggcaggatttgttcctaggaatgggttaattaataatatttccagttcaagggca
atgagcatttctctaggggacaaatgttccttggattgttttacaactcctataaaatat
ccagaatgcttgtgtttaagtgattatttatcaaagcccagcattctagatgatgatttt
gatgaatccattttgaatgagattgatgctatatgtgagcagaattctgctgcaaaagtt
gaaatccagagctccaatagcagtcttcttgaggaaaataaatacaaagaggaaaatatt
ggttgtaattttgctagttcagtgtcagtttctgcagatgatgatatgagaacacgagtt
gcttttgaatccagtggtgatttggtatcaagaaaggaggaaaaggatacttcccagcta
attgagcatggaaatatgccagaagaatactcgaagtacttgcagtctttgaacaatagg
caacgagaagcagcatgcagtgatatttccgtcccattgatgattgttgctggtccagga
agtggaaagacttccacaatggttgggcgagttctgatgcttctcagtgagggaattagt
ccgacaaacatcctagcaatgactttcaccactgctgcagcttctgagatgcgagatcgg
attggagcagtggctggaaaagcaatagctaaagaacttatgatcagcaccttccattca
ttttctttgcaactttgtcgttcatatgcagagaagttaggacgcaccccagaattctta
atctatgggcagggacaccagagaagagcaatcattgaggctatgcgtctattagaaaag
caaaagactgcgatacaaaatattgacgaagcttctaatggtataacgtctccagaacat
ttcaaggataagtcaaagaaatggcaaaggtttgtgactaaggctaaagcttcaggaaag
acacctgcagattgcaataaaatgggtgatgtgataggagcttcaatacttgggaactac
aatgacattttgcgatcttgcgatgccctggactaccacgacttaatcagctgttctgtg
aagttgctcactgattatcctgatgtatttgaagagtgccagaattcatggaaagccatt
gtgatagatgagtttcaggacacaagtgccatgcaatacaatcttctacggcttcttgca
tcccacagtcaaataactattgttggtgacgatgatcagtccattttcagtttcaatgga
gctgacatttcagggtttaattcatttcgtctagattttccaaattataaagagattagg
ctcaacaaaaactatcgatccactcgccatattgttgaagctgcatcttttcttattcaa
aataatatgaagcgatgccagttcaaagaagtcgttactgataattcttccggatctaag
ataatcatcaaggaatgtcataatgagcatgcacagtgttcatttgttgttgataagacc
ttggaaattgcatccaatggatcacctgataaaccttcttatggaagcattgccgttctt
tatcggaggcaggcgtcgggaaaagccttccaagtagcatttcgtgacagaaaaatacca
tttaatgttcatggtgtggctttctacaggaaaaaggtagttaaagccattattgctatg
cttagaacaacgctgccaggatgtgatgatggcccatatcgtcaagttttcaaggctatg
cttccatttgagaaggatgaaaagaagagagttattgaccacatcgacaaaatcttaacc
attagaaaatgcagcttcatatctgttgccaatgacgtctttagcgcaaagctctctggt
acctttaacaggagtcaactcagccagggacgcaaagtgttgttgactctggagatgata
tcaaagcttgttcaaagggaacagtcaatttcagcagtcataacttcagtggccaatatg
gtacctcagaaataccttcttgagcaacgggcagtggttgatgttgatggaggcaaattg
ttgaatgaagaaaatgacctcagatctgtgcttcagtacttattggatgatgtctctgat
tttttatcaatgcaatgtgctaagaaaggagaagctggagatgtgaaagaagaagagaaa
ggttgtcttagattactcaaagcttttattgactacataactgagcgagagaaagaaaat
tttcgttcccggagacatgataatgaaaattcagttaccttgactaccatccatcagtct
aaaggtttggagtgggacattgttttcattgtaaaggtaaatgaatctgaaattccttta
ttacatgaatccaatggcactacgaaggaaaatgggacatcaattgaagaggaaagacgt
ctgttatacgtggcaatgactcgcgctagaaagaaactattcattctgtatgtcatgatg
gattcaaattggcagatgcttcaaccatcgcgttttctcaaggagattccagatcatctt
cgggagattcaggctgaagtatgtctacgagatttacaaacaaaacctcaagatattcca
aaacaacctgtcaacattaccactaatctaccaggagaaaagaattcttctgaagttgac
atggagcccaatgattccctcaacattcaaatcaataatgcctccaaggaaataacagag
ccggtagatgcatgcaatggaaatattttcttaaaaagattctctgtggaggacagatca
gttgtttctcacttgttccacaaatgggccaagaagcaagcatttcaaaaccctaagagg
ttacttgacaaggttggctttgttattgatgaacgtctaagaatcaagaaaagcaagcac
aaggatgttttgcatgctttgaaaccttgcttaagcagtgaggaagccttccaatatgcg
gaatatgtgctgagatgggagcaaattcctgcagatgaacgtgcccatttgatgcgggag
aagcaggagtactttcagaaattaaggattgagaattcgatgagtacatcagcgccaaca
gctaaacagattgggtttctgcagaatttgggatgcactgtggtccccatatcacgtctc
catgcctcacgtttgatcgagcaatataaatcattgtaa
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