Manihot esculenta (cassava): 110631009
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Entry
110631009 CDS
T05761
Name
(RefSeq) YTH domain-containing protein ECT4 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110631009
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110631009
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
RE_AspBHI_N
DUF3942
Motif
Other DBs
NCBI-GeneID:
110631009
NCBI-ProteinID:
XP_021634388
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Position
14:177077..184073
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AA seq
642 aa
AA seq
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MDAEEKPVEPDTMTERTLSAKNETSVSPNSSRDAAIMGPRRENTGHLGPFGLHGDHTLYP
SNVYAPQAQAFYYRGYNNAIGEWDEYPPYVNAEGLEIGSSGVYNDNGSIVFHPGFGYGPQ
MPYGPYSPVTTPLPSVGGDSQLYSSQQFPFSGPYYQQLGPPSTPYITSPTPISQPELSIP
SVDQQGDHMLFGPRPSYPPILGSFGGGNISGNLGTLGFHDLQQGFDGLRSGGLWSDWSNS
SDRHRPLTPLSPAVSPQPIGSFGSYGHNVGMASQQQRSFYGIVSGSNSYTSGYMHSGLSQ
GSGFGSASISSLATNSKGWLSHENSRSLGRASISVCSCNGSLDILSEQNRGPRASKPKSQ
NAVEHTSSIDNSKHGKSTANVHDALYNRPDFVTEYNDAKFFIIKSYSEDNVHKSIKYGVW
ASTPNGNRRLDAAYSEAKEKQVPCPVFLFFSVNASAQFCGVAEMVGPVDFDKSVDYWQQD
KWSGQFPVKWHIAKDVPNSQFRHIVLENNDNKPVTNSRDTQEVKLEQGIEMLNIFKNYEN
DMSILDDFDFYEDRQKAMQERKARQQLSPMAAGVAGANEHRSAITLPSDFIKQMSKSFAQ
VVSLEESSKEGPVTDKAGSVSDSSTRVKAEDAIAGVSSTKTG
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagaagaaaaacctgttgaacctgataccatgacggagcggactctttctgca
aaaaatgagacatcagtttctcccaattcctctagggatgctgccattatgggtcctcga
agggagaacacaggtcacttggggccttttggtttgcatggagatcacaccctctatcct
tctaatgtttatgcccctcaggcacaggcattctactatagaggttacaataatgccatt
ggtgaatgggatgaatatcctccatatgtcaatgctgaaggattagaaattggatcatct
ggtgtctacaatgacaatggttccattgtattccatcctggatttggctatggtccacaa
atgccgtatggaccatattctccagtcacaacacctttgccttctgtaggtggagattct
cagttatactcttcccagcaatttccattttctggcccttattaccagcaattaggtcct
cctagtacgccatatattacttcaccgactccaatttcacaaccagagctcagcatacca
agtgttgaccaacagggtgatcacatgctttttggaccaaggcctagttatcctcccatt
ctaggatcatttggtggaggcaatatttctgggaatcttggtactcttggttttcatgat
ttacaacaggggtttgatggattgaggtctggaggactttggtcagattggtcaaattcc
tctgatagacataggcctctaactcccttatcacctgcagtttctccacagccaattggc
agttttgggtcatatgggcataatgttggaatggcatctcaacaacaaagatcattttat
ggcattgtatccggttcaaactcctatactagtggctacatgcacagtgggttaagtcag
ggttctggatttggaagtgcatcaatttctagtttggcaacaaacagcaagggttggctt
tctcatgaaaacagcagaagtctggggagggccagcatttctgtatgcagctgtaatggt
agtcttgatatccttagtgagcaaaaccgaggaccaagggcctctaagcctaagagtcaa
aatgccgtggaacatacttcttccattgataatagcaaacatggcaaatccactgcaaac
gttcatgatgcattgtataaccgaccagattttgtcactgaatacaatgatgctaaattc
tttatcatcaaatcatacagtgaagataatgtccacaagagcatcaaatatggtgtctgg
gccagcacaccaaatgggaacagaagattggatgctgcttatagtgaagctaaggaaaag
caagtcccttgcccagttttcctcttcttttcggtgaatgctagtgctcagttctgtggg
gtggctgaaatggttgggcctgttgattttgataagagtgtggattactggcagcaagat
aagtggagtgggcagttccctgtgaagtggcatattgctaaagatgtcccaaacagtcag
ttccgtcacattgtattggaaaataatgacaacaaacctgtcactaacagtcgagacacg
caggaggtgaaattggagcagggcattgagatgttgaacatttttaagaactatgaaaat
gacatgtcgatcctggatgattttgacttttatgaagacagacagaaggccatgcaagaa
cgcaaggctagacagcaattgagcccgatggctgccggtgtcgctggagcaaatgagcac
agaagtgccattaccttacccagtgattttatcaagcagatgtccaagagttttgctcaa
gttgtctccttggaagagtctagtaaagaaggtcctgttactgataaagccggctctgtc
tctgatagctccaccagagttaaggcggaagatgcaattgcaggtgtttcttctaccaag
acaggttag
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