KEGG   Manihot esculenta (cassava): 110631174
Entry
110631174         CDS       T05761                                 
Name
(RefSeq) ubiquitin receptor RAD23c
  KO
K10839  UV excision repair protein RAD23
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03420  Nucleotide excision repair
mesc04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110631174
  09124 Replication and repair
   03420 Nucleotide excision repair
    110631174
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:mesc03051]
    110631174
   03400 DNA repair and recombination proteins [BR:mesc03400]
    110631174
Proteasome [BR:mesc03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    110631174
DNA repair and recombination proteins [BR:mesc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      110631174
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin Rad60-SLD UBA_7 CUE UBA_RAD5A TECR_N Rad60-SLD_2 UBA_3 Dsc3_N Ubiquitin_4
Other DBs
NCBI-GeneID: 110631174
NCBI-ProteinID: XP_021634606
LinkDB
Position
1:complement(30848354..30855813)
AA seq 382 aa
MKVFVKTLKGSNFEIEVKPEDTVADVKKNIEIVQGVDIYPAVQQMLIHQGKVLKDDTTLE
ENKVAENSFIVIMLSKSKVSSGGPSTASAAPPSQARPATSLPSSATQPSTTTQAPAPTSE
PPQSAIESAPTVVSPVSSESDIYGQAASNLVAGSNLEATIQQILDMGGGSWDHETVVRAL
RAAYNNPERAVEYLYSGIPEQAEVQPVARVPASGQATNPPAQGEQPAVPTSAGPNANPLD
LFPQGLPSMGSNASAGTLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIQ
EHQADFLRLINEPMEGEGNPLNQLASAMPQAVTVTPEEREAIERLEAMGFDRALVLEVFF
ACNKNEELAANYLLDHIHEFEE
NT seq 1149 nt   +upstreamnt  +downstreamnt
atgaaggttttcgtgaagactttgaagggttctaacttcgagatcgaagtaaaacctgaa
gacacggttgctgatgtcaagaaaaacatagagatagtacagggtgtggatatttaccct
gctgtgcaacagatgctgattcatcaggggaaagtcctcaaagatgacacaacgctggaa
gaaaataaagttgctgaaaatagttttattgtcatcatgttaagtaagagcaaggtttca
tcaggaggaccgtcaactgcttcagctgcacctccaagtcaagcccggcctgcaacttct
ttgccttctagtgcaacacaaccttcaacaactactcaagctcctgctccaacttctgaa
ccaccacaatctgccattgaatctgctcctacagtagttagtcctgtttcttcagaatca
gacatatatggacaagcagcatcaaatcttgttgcgggaagtaatttggaggctaccatt
caacagatacttgacatgggtggaggcagttgggaccatgaaactgttgtgcgtgctcta
cgtgcagcatataacaaccctgagagggctgttgaatatctttactctggcattccggag
caagctgaagttcaaccagttgcccgagttcctgctagtgggcaggctacaaatccacca
gcgcagggtgaacaacctgcagtacctaccagtgccgggccaaatgctaatcctctagat
ttatttccacagggccttcccagtatgggttccaatgctagtgcaggcaccttagatttt
ttgcgcaacagtcaacagttccaagcattgagggctatggtgcaagcaaatccccaaata
ctccagcctatgcttcaggagcttgggaagcaaaatccacatcttatgcgactcattcaa
gagcatcaggccgacttcttgcgcttgataaatgaacctatggaaggagaagggaaccca
cttaaccagttggcctcggcaatgccacaggctgtgaccgtcacccctgaggagcgggag
gcaattgagcgtcttgaagcaatgggatttgatcgagcccttgtgttggaagtattcttt
gcatgcaacaagaatgaagaactggcagccaactatctattagatcacatccatgagttt
gaggaatga

DBGET integrated database retrieval system