KEGG   Manihot esculenta (cassava): 110631239
Entry
110631239         CDS       T05761                                 
Name
(RefSeq) RING-H2 finger protein ATL40
  KO
K19038  E3 ubiquitin-protein ligase ATL41 [EC:2.3.2.27]
Organism
mesc  Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mesc04121]
    110631239
Enzymes [BR:mesc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110631239
Ubiquitin system [BR:mesc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    110631239
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-C3HC4_2 zf-RING_11 zf-C3HC4 zf-RING_UBOX zf-ANAPC11 zf-RING_5 zf-C3HC4_3 zf-RING_16 Prok-RING_4 zf-RING_4 zinc_ribbon_16 zf-Nse zf-RING_6 zf-RING-like m04gp34like zf-C3HC4_4 Zn_ribbon_IFT122_C zf_RING_Vps8_fungal zf-RING_10 PHD RINGv Baculo_RING DUF1272 PHD_NSD Prok-RING_1
Other DBs
NCBI-GeneID: 110631239
NCBI-ProteinID: XP_021634685
LinkDB
Position
12:complement(16599139..16600166)
AA seq 265 aa
MAAPPLPHPHPRLFPTPNSGLLMSDGVMDNSVFHQRDTYDLNSKIMLTAIVSLSFVVVLV
VILHLYARCILRRQARQRAMIRSLGFTTTDAHNHPGEPPKIGLDPAVIASLPIFVYKQTA
IGENDDSSSVECAVCLSVLEDQEKARLLPNCNHTFHAECIDKWLSSHSTCPICRSEAEPR
IQPVAREGPVGGAAAAPPLEDVNSTLTVCVEGTSDGVNQVSSNKAAAGGSISRLSSFRRI
LSRERSSRRLQSEAQEEGFQDLERQ
NT seq 798 nt   +upstreamnt  +downstreamnt
atggcagcccctcctctcccccatccccaccctcgccttttccccaccccaaattccggt
ctcctaatgtccgatggagtaatggataactcagttttccaccaaagggacacatatgat
ttgaacagcaagatcatgctcactgcaattgtatcattatcatttgttgtagttctagtt
gtaatcctccatctttacgcaagatgtattctcagacgccaagctcgtcaaagggctatg
attcgcagcctgggattcacaaccaccgatgcccataaccaccccggtgagccacccaag
atcggtcttgatcccgccgtcattgcttcacttcccatatttgtctataagcagactgcc
attggcgaaaacgatgactcatcatcagtagaatgtgctgtctgtttaagcgttcttgag
gatcaagaaaaggcgaggcttttacctaattgcaaccatactttccatgcagagtgtata
gataaatggttgagttcacattctacttgccccatctgccgctcggaggctgagccaagg
attcagccggtggcccgtgagggtccggttggcggtgcagcagcagctccgccgttggag
gatgtgaattctacattaactgtgtgcgtagaggggacgtcagatggcgtcaatcaagtt
tctagcaataaggcagctgccgggggctcaatttctcggttgagctcttttcgaaggata
cttagccgggaaagatcatcaagaaggcttcaatccgaggctcaagaagaaggcttccaa
gatctagagagacagtaa

DBGET integrated database retrieval system