Manihot esculenta (cassava): 110631348
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Entry
110631348 CDS
T05761
Name
(RefSeq) protein argonaute 7
KO
K11593
eukaryotic translation initiation factor 2C
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110631348
03036 Chromosome and associated proteins [BR:
mesc03036
]
110631348
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
110631348
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
110631348
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
110631348
microRNA pathway
RISC loading complex
110631348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
DUF3734
TBCC_N
Piwi_N
CCDC113_CCDC96_CC
P22_AR_C
Motif
Other DBs
NCBI-GeneID:
110631348
NCBI-ProteinID:
XP_021634841
LinkDB
All DBs
Position
1:complement(6286824..6290871)
Genome browser
AA seq
1021 aa
AA seq
DB search
MEDSDESNGGNKCTTKARTLRARAKTNSTHKHEYQYQYQHQLFQYSNQYGFFNHNQIQYP
SYYPALLPLPPPIPIQLALTPPLLQNHSFRSKTHLQKPSCNLNNHPLPTSSVSQGPVVTI
SSAPEGLQQRKSPPVKRNDGRTAVQSTPHSQALIAARRPDSGGVEGSVVTLVANHFLVQF
NSSQRIFHYNVEISPNPSKEVARMIKEKLVQDNSAVFSGTFPAYDGRKNLYSPVEFQNDR
LEFYMSLPIPSSKSSLPLGELNDFQEKHLQLKLFRINIKLASKLDGKELSRYLSKEGDDW
IPLPQDYLHALDVVLRESPMEKCIPVGRSFYSSLMGGTKEIGGGAVGLRGFFQSLRPTQQ
GLALNVDFSVTAFHESIGVIPYLQKRLKFLRDLPQNKTRSLIIEERKEVEITLKNIRVFV
CHRETVQRYRVYGLTEEATDNIWFADRDGKKLRLVSYFKDHYNYDIKFRNLPCLQISRSK
PCYLPMELCMICEGQKFLGKLSDDQTAKILKMGCQRPKERKTIINEVMRGSVGPTSGKQS
REFKLNVSREMTRLNGRILQPPKLRLGDGGLVRDLTPSRHDRQWNLVDSHVFEGTRIERW
ALMSFGGTLDQKSNIPKFINQLSQRCEQLGIFLTKNTIISPQYESTQVLNNVALLESKLK
KIQKAAANNLQLLICIMEKRHKGYADLKRIAETNVGVVSQCCLFPNLGKLNPQFLANLAL
KINAKVGGCTVALYNSLPSQIPRLFHSDEPVIFMGADVTHPHPLDDFSPSVAAVVGSMNW
PETNKYASRMRSQTHRQEIIQDLGAMVKELLDEFYQEARKLPKRIIFFRDGVSETQFYKV
LQEELRAIQEACSRYPGYRPLITFAVVQKRHHTRLFHCETDESSIQNQFYGENIPPGTVV
DTVITHPKEFDFYLCSHWGVKGTSRPTHYHVLWDENQFTSDELQKLVYNLCYTFVRCTKP
ISLVPPAYYAHLAAYRGRLYLERSESMASMRNGSKISRAAPPKATPLPKLNENVKNLMFY
C
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggaggactcagatgaatccaatggtggcaacaaatgcaccaccaaggctagaactttg
agagccagggctaagaccaactccacccataagcatgagtatcaatatcaatatcagcat
cagctctttcaatattcaaaccagtatgggttctttaatcacaaccaaatccaataccca
agttactacccagctcttcttcctctgcctcctccaatacctattcaacttgctctgacc
ccacctttgcttcaaaatcatagctttagatcaaaaacccatttgcagaaaccttcttgt
aatctaaataatcatcctcttcctacctcttctgttagtcaaggacctgttgtcacaatc
tcatcagctccagaggggctgcagcaacgaaagagccctcctgtcaaaagaaatgatgga
agaacagctgtgcaatccaccccccattcccaagctcttatagctgcaaggagaccagat
tctggtggtgttgaaggatcagttgttactcttgtggccaaccattttcttgtccaattc
aattcgtcgcagagaattttccattacaatgtagaaatttctccaaatccttccaaggaa
gttgccaggatgatcaaagaaaaactggtccaagacaattcagctgtgttctctggaact
tttccagcctatgatggccggaagaatctttacagcccagttgaattccaaaatgatagg
cttgaattctacatgagcctcccaatcccaagtagcaaatcatcattgcctcttggagaa
ctaaatgactttcaagagaagcatctgcagctcaaactattccggataaacatcaagttg
gcgtcgaagttggacgggaaggaactgagccggtacttgagcaaagaaggtgatgattgg
atcccacttcctcaggattatctacatgctttggatgttgttttgcgcgagagtccgatg
gagaaatgcatacctgtagggagatcattctattcaagtttaatgggcggaacaaaggaa
attggaggaggagctgttggattgagaggattctttcaaagtcttagacccacacaacaa
ggactagctctcaatgtagatttctccgtgaccgcttttcatgaaagtatcggagtgatc
ccctacctgcaaaagcgtctcaagtttctgagggaccttcctcaaaacaaaacaaggagt
ttgattattgaagaaaggaaagaagtggagataactttgaagaatatcagggtctttgtt
tgccacagagaaactgttcagagataccgggtttatggcttgactgaagaagctacggat
aatatctggttcgccgacagggacgggaagaaactgaggctggtgagttacttcaaggat
cactacaattatgacataaaattcaggaacttgccatgtttgcagattagtagaagtaaa
ccatgttatcttcccatggagctttgtatgatttgtgaaggccagaagtttcttgggaaa
ctgtccgatgatcagacagcaaaaattctcaagatgggctgccaaagacctaaagaacga
aaaaccattattaatgaggtcatgagaggatctgttggaccaacaagtggcaagcagagc
agagaattcaaactcaatgtttcaagagaaatgacaagactgaacgggaggatcctgcag
cctccgaaattaagacttggtgatggtggactggtaagagatctgactccttctcgccat
gatcggcaatggaaccttgtggacagccatgtctttgaaggaacaagaatagaaaggtgg
gcactaatgagttttggaggcacccttgatcagaagtccaacattccaaaatttataaac
caactatcacaaaggtgtgaacagttaggcatttttcttactaaaaacacaataattagc
ccacaatacgagtcgactcaagtgcttaacaatgtcgcccttctggaatcgaaactgaag
aaaatccagaaggctgccgccaacaatctccagctgcttatttgtataatggagaagaga
cacaaaggatatgcagatttgaagcgaatagcagaaacaaatgttggtgttgtaagccag
tgctgcttgtttccgaacctcggcaagttgaatccacaatttctagctaatttggctctc
aagatcaatgctaaagttggaggatgcacagtcgctttgtacaattcgttaccctcgcag
attccacgcctatttcattctgatgaacctgtgatcttcatgggagctgatgtaactcat
cctcaccctcttgatgacttcagtccatcagttgctgctgttgttggtagcatgaactgg
ccagaaacaaacaagtatgcatcacgaatgaggtcgcaaacgcatcgacaagaaattatt
caggaccttggtgcaatggtgaaagaattgctagatgaattttatcaagaagcaagaaaa
cttcccaagaggataatattcttcagggatggagtaagcgaaacccagttctacaaggtg
cttcaagaggagttgcgggcgattcaagaagcatgttcgagatacccaggttatagacct
ctcattacatttgcagttgtccaaaagagacaccatacaaggttgtttcactgtgaaaca
gatgaatcttccattcaaaaccagttttacggcgaaaacatacccccaggaacagttgtg
gatactgttattactcatccaaaggaatttgatttttatctatgcagccattggggagta
aaaggaacaagtaggccaactcattaccatgtcttgtgggatgagaaccaattcacttct
gatgaattacagaagctagtttacaatctctgctacacatttgtaaggtgcacaaagcca
atttctttggtgcctcctgcttactatgcacacttagctgcatacaggggcaggctttac
ctcgaacgatcggagtcaatggcttccatgagaaatggttctaagatctcaagagctgct
ccaccaaaggcaacacctctgccaaagctcaatgagaatgtaaagaatctcatgttctat
tgctga
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