Manihot esculenta (cassava): 122721382
Help
Entry
122721382 CDS
T05761
Name
(RefSeq) dual-specificity RNA methyltransferase RlmN isoform X1
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mesc03009
]
122721382
Enzymes [BR:
mesc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
122721382
Ribosome biogenesis [BR:
mesc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
122721382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Radical_SAM_2
DUF5703
Trigger_N
Motif
Other DBs
NCBI-GeneID:
122721382
NCBI-ProteinID:
XP_043804968
LinkDB
All DBs
Position
12:2545961..2551984
Genome browser
AA seq
454 aa
AA seq
DB search
MEMGCMWMRRVRVVLVANHPLMASPSATLSIPHSHPCHQSFPPLKPSPFSFSNSLSTSTR
RCLSTTGCSSSLPLVDLGNGDMDAIPQKGAKVLLKGMRYSELEQWVQSYGFRPGQAMMLW
KRLYGQNIWAHYVDELEAGLNKDFKKILSEHAELKAISLEDVRTASDGTRKILFRLDDQL
VIETVIIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTTAEIVDQVVFAQRLVTS
EVGPITNVVFMGMGEPLQNIENVIKAADIMVHDQGLHFSPRKVTISTSGLVPQLKRFLQK
CNCALAVSLNATTDEVRNWIMPINRKYNLSLLLDTLREELKFKNNYKVLFEYVMLAGVND
SFEDAKRLIDLVQGIPCKINLIQFNPHSGSQFRPTNTEKMIEFRNILAEAKCTVFLRHSR
GDDQMAACGQLGKLGAVQAPLLRVPQQFQMAVNG
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggagatgggttgtatgtggatgaggcgcgtgcgggttgtgcttgttgctaatcaccct
ttaatggcctccccatctgctaccctttcaattccccattctcatccttgtcatcaatcc
tttccacctctaaaaccctcaccattctccttctccaattctctttccacttctacccgt
cgctgcctttccaccaccggttgttcatcttcactccctcttgttgatctgggaaatggc
gacatggatgctattcctcagaagggtgcgaaggtgcttctcaaaggaatgagatactct
gagcttgagcaatgggttcagtcttatggattcagacctggtcaggccatgatgctgtgg
aagcggctttatgggcaaaatatttgggcgcattatgttgatgaattagaagcaggtttg
aataaggattttaagaaaatattgagtgaacatgctgaattgaaagcaatatctttggaa
gatgttcgtacagcatctgatggaactagaaagattttatttaggttggatgatcaactg
gtaattgagacggttatcataccttgtgatagaggtaggacaacagtttgtgtttcaagt
caagtgggttgtgccatgaactgtcagttctgctacactggcaggatgggtttgaagaga
catctgaccactgcagagattgtagaccaggttgtatttgcacaacgacttgttacaagt
gaagttggtccaatcacaaatgttgtatttatgggcatgggagagccacttcagaacatt
gaaaatgtcattaaggccgctgatattatggtgcatgaccaaggccttcacttcagtcct
cgcaaggtcactatttctacaagtgggctagtcccccaattgaaacgtttcctccagaaa
tgcaattgtgctttagctgttagcctgaatgctacaactgatgaggtcagaaactggatc
atgccaattaacaggaaatataacttaagcttgcttcttgacactcttcgggaggaactt
aagttcaaaaataattacaaggtcctgtttgagtacgtgatgcttgcaggagtaaatgac
agctttgaagacgcaaagaggcttattgatcttgtgcaaggcattccatgcaagataaat
ctcattcaatttaatcctcattctggatcccagtttagaccaacaaatacagagaagatg
atagagtttcgaaatattttggcagaggccaaatgcaccgtcttcttacggcacagtaga
ggtgatgatcagatggctgcttgtggtcaacttggcaagcttggggctgtccaagcaccg
ttgctccgtgtcccgcagcaattccagatggctgtaaatggttaa
DBGET
integrated database retrieval system
