Manihot esculenta (cassava): 122721932
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Entry
122721932 CDS
T05761
Name
(RefSeq) probable beta-D-xylosidase 5
KO
K15920
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00520
Amino sugar and nucleotide sugar metabolism
mesc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
122721932
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
122721932
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_3_C
Glyco_hydro_3
Fn3-like
Motif
Other DBs
NCBI-GeneID:
122721932
NCBI-ProteinID:
XP_043807091
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Position
2:17052459..17055257
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AA seq
747 aa
AA seq
DB search
MAEFGYCDSSLSFDMRAKDLVDRMTLEEKVQQLGNFAAGASRLGLPAYEWWSEALHGVSN
TGPGTFFDETVPGATSFPTVLLTTASFNQSLWKRIGQVVSSEARAMYNLGRAGLTYWSPN
INVVRDPRWGRIQETPGEDPYIVGTYASTYVRGLQDIEGTENITDLNSRPLKVAACCKHY
TAYDIEDWMGVDRFHFDARVTEQDMLETFQKPFEMCVKDGDASSVMCSFNRINGVPVCAD
KKLMQDTIRGDWDLHGYIVSDCDSIEVMVDGHKWLGDTQEDAVSQVLKAGLDLDCGDYYP
KSLKKAVMQGQVSEAEVDKSLKYLYVVLMRLGYFDGSRFNSLGKKDICTHENFELAAEAA
KQGIVLLKNDNETLPLNSSKYKKLAVIGPHGNATKAMIGNYAGVPCRYVSPIEGFSAFGE
VKYEMGCGDVACKNDSLIFPAMEAAREADATILVVGLDLSVESEGRDRVDLLLPGYQNLL
INQVSKASKGPVILVIMTAGGVDISFAKESTNIQSILWAGYPGQEGGRAIADIVFGKHNP
GGRLPLTWYEAEYANLVPMTSMTLRPIANPVANLSYPGRTYKFFNGSTVYPFGYGLSYTN
FNYKIAPSKTLIKIKLNKYQHCSNLNYEYNDDKPYCPAVLVDDCPCEQEFRVAITVKNVG
KMDGSEVVIVYSKPPKGITETHAKQVIGFERVFVQAGGETKTKFRFNVCKSLAIVDKKGY
KVLPSGLHTIMVGDANVSFFVSVQYYK
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtttggctattgtgactcttccctatcatttgacatgagggctaaagattta
gtggatagaatgactttagaggagaaggtacaacagttgggaaattttgctgccggtgca
tctcgattaggattaccagcttatgaatggtggtctgaggccttgcatggtgtctctaat
accggtccagggaccttctttgatgaaactgttcccggtgcaacaagtttccctactgtt
ttacttacaactgcatcctttaaccaatctctctggaaaagaattggccaggttgtttca
tctgaagccagagcaatgtacaacttagggagagctggattaacatattggagcccgaat
ataaatgtggtaagggatcccagatggggaagaattcaagagacaccaggggaggatcca
tatattgttggaacatatgcctcgacttatgtaagagggcttcaagacattgaaggaaca
gaaaatatcacagatttgaactctagacctctcaaagttgctgcttgttgtaagcattat
actgcttatgatatcgaagactggatgggagttgatcgattccattttgatgcaagggtg
actgagcaagatatgttggagacgtttcaaaagccattcgaaatgtgtgttaaagacggt
gatgcaagcagtgttatgtgctcttttaatcgtattaatggtgtccctgtttgtgctgat
aagaaacttatgcaagacacaattagaggagactgggatcttcatgggtacatagtttca
gactgtgattcaattgaggtgatggttgatggccataaatggcttggggacactcaagag
gatgctgtttcacaagtcctcaaggcaggattggatcttgactgtggagattattatccc
aagtctctaaagaaagctgtgatgcaaggacaagttagtgaagcagaggttgacaaatca
ttaaaatatctatatgttgtcctaatgaggctaggatactttgatgggagtcgtttcaat
tcacttggcaagaaggatatttgcactcatgagaattttgaattagcagcggaagcagct
aaacaaggaattgttcttcttaaaaatgacaatgaaactttgcctttgaattcttccaaa
tacaagaaacttgctgtaattggaccacatggcaatgctacaaaagcaatgattggaaat
tatgcaggtgttccttgccggtatgtttctccaattgaaggattctctgcatttggagag
gtcaaatacgaaatgggatgcggagatgttgcttgcaaaaatgatagtttgatctttcca
gcaatggaagctgcacgtgaagcagatgccacaattttagtggtgggcttggacttgtct
gttgaatctgaaggcagggacagggtggatctcctcctcccaggttaccagaatctattg
atcaatcaagtttctaaagcctctaaaggaccagtgatccttgtaattatgacagcaggt
ggagttgatatctcttttgccaaggagagtacaaacatacaatccatcttgtgggctgga
tatcccggccaagaaggtggtcgagccattgctgatattgtttttggaaaacacaatcct
ggcggaagattaccactcacatggtatgaagccgaatatgctaatttggtacccatgaca
tctatgacactaaggccaattgctaacccagttgctaatttgagctaccctggaagaaca
tacaaattcttcaatggatcaacagtttacccatttgggtatggtcttagctacaccaac
ttcaactacaagatagcaccctcaaagactttaatcaagataaaattgaacaagtaccaa
cattgcagcaacttgaattatgaatacaatgatgataagccatattgtccagctgttttg
gttgatgactgtccttgtgaacaagagttcagagttgcgattacagttaaaaatgtaggt
aaaatggatgggagtgaagtggtaatagtttactcaaagcctccaaaggggatcacagaa
actcatgccaaacaagtgattggttttgaaagggtattcgttcaagcaggaggggaaacc
aagacgaagtttagatttaatgtatgtaagagcttagcaattgtggataaaaaaggttac
aaggttttgccgtctggtttgcacaccattatggtgggagatgctaatgtctcatttttt
gttagtgtgcagtattacaagtag
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