Manihot esculenta (cassava): 122722211
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Entry
122722211 CDS
T05761
Name
(RefSeq) polygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00040
Pentose and glucuronate interconversions
mesc01100
Metabolic pathways
Module
mesc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122722211
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
122722211
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GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
Ribosomal_S17e
NosD
Motif
Other DBs
NCBI-GeneID:
122722211
NCBI-ProteinID:
XP_043808328
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Position
17:8013074..8014986
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AA seq
366 aa
AA seq
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MGSKVHVCAAYLVLLFAFTSGAQPNTFDVTKYGAKEGSDITKALLSAWKGACGAAGSGKV
VIPKGKYSLGVVDLLGPCKGAMHLQVEGTLVAPAKASQHRKNSWVTLRYLDRLTVSGGGA
FDGQGEIAWQRESCGGGCKKALPVLRFLCVTVLSKLYQNLRFDFVTNSIVEDVTSIDSKQ
FHVNLLGSKNLTFQRFSVKAPGHSPNTDGIHIGRSEEINIIDSNIMTGDDCISIGRGSRQ
VRITNVRCGHGHGISIGSLGKYEKEEPVSGIYVKNCTIYDTDNGVRIKTWPALHGGSVSN
IQFEDIVMQNVSNPIIIDQMYCPHNECNRKVTFQFLFFHNKKENLYIWVCYNYAKILRLF
ADAIKS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgggttccaaggtacatgtgtgcgcagcatatttggtgttactgttcgcctttaccagc
ggagctcagcccaatacctttgatgtcacaaaatatggtgcgaaggaggggtcggatatc
actaaggctttactgagtgcgtggaagggggcttgtggagcagcgggttccggcaaagtc
gtgataccaaaagggaagtactcattaggcgtggtggatttgctaggcccttgcaagggt
gccatgcatcttcaagtggaaggaacgttggtggcgccagcaaaagctagccagcaccgc
aagaatagctgggttacattgagatacctggaccgattaacggtatccggtggtggggcc
ttcgacggacaaggagaaattgcttggcagcgggagagctgtggcggcggatgcaagaaa
gcacttccagttctacgttttctctgcgtaactgttctatcaaaactgtatcagaaccta
aggtttgacttcgtcaccaacagcatagtcgaggacgtgacatccatagatagcaagcag
ttccacgtcaatctcctcggcagcaaaaaccttaccttccagcgattttcggtgaaagcg
ccggggcatagtcccaacacggatggaattcacattggacggtcggaggagatcaacatt
attgattcaaacattatgaccggtgatgattgcatctccattggccgggggagcaggcaa
gtacgaatcacaaacgtaaggtgcggacacgggcatggcattagtattggaagtttagga
aagtacgagaaggaagaacctgtgtctggaatttatgtgaagaattgcacaatatacgac
accgacaatggcgtgagaattaagacttggcccgcattgcatggtggcagtgtgtcgaat
atccagttcgaggatatcgtcatgcaaaacgtcagcaatcccatcattatagatcaaatg
tactgcccgcataacgaatgcaatcgcaaggtaacttttcaatttttattttttcacaac
aagaaggagaatttatatatatgggtgtgttacaattatgctaaaatattgcgacttttt
gcagatgccatcaaaagttaa
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