Manihot esculenta (cassava): 122722214
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Entry
122722214 CDS
T05761
Name
(RefSeq) polygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00040
Pentose and glucuronate interconversions
mesc01100
Metabolic pathways
Module
mesc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122722214
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
122722214
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GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
122722214
NCBI-ProteinID:
XP_043808332
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Position
17:8064315..8065776
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AA seq
350 aa
AA seq
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MGSKVHVCAAYLVLLFAFTSGAQPNTFDVTKYGAKEGSDITKALLSAWKGACGAAGSGKV
VIPNGKYSLGVVDLLGPCKGAMHLQVEGTLVAPAKASQHRKNSWNLRFDFVTNSIVEDVT
SIDSKQFHVNLLGSKNLTFQRFSVKAPGHSPNTDGIHIGRSEEINIIDSNIMTGDDCISI
GRGSRQVRITNVRCGHGHGISIGSLGKYEKEEPVSGIYVKNCTIYDTDNGVRIKTWPALH
GGSVSNIQFEDIVMQNVSNPIIIDQMYCPHNECNRKMPSKVKISDVIFKNIRGSSRTPTA
VQLTCSSSVPCKNVELSNVNLQYTGSKGPAKSICTNVKPKIIGKLIPRGC
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgggttccaaggtacatgtgtgcgcagcatatttggtgttactgttcgcctttaccagc
ggagctcagcccaatacctttgatgtcacaaaatatggtgcgaaggaggggtcagatatc
actaaggctttactgagtgcgtggaagggggcttgtggagcagcgggttccggcaaagtc
gtgataccaaatgggaagtactcattaggcgtggtggatttgctaggcccttgcaagggt
gccatgcatcttcaagtggaaggaacgttggtggcgccagcaaaagctagccagcaccgc
aagaatagctggaacctaaggtttgacttcgtcaccaacagcatagtcgaggacgtgaca
tccatagatagcaagcagttccacgtcaatctcctcggcagcaaaaaccttaccttccag
cgattttcggtgaaagcgccggggcatagtcccaacacggatggaattcacattggacgg
tcggaggagatcaacattattgattcaaacattatgaccggtgatgattgcatctccatt
ggccgggggagcaggcaagtacgaatcacaaacgtaaggtgcggacacgggcatggcatt
agtattggaagtttaggaaagtacgagaaggaagagcctgtgtctggaatttatgtgaag
aattgcacaatatacgacaccgacaatggcgtgagaattaagacttggcccgcattgcat
ggtggcagtgtgtcgaatatccagttcgaggatatcgtcatgcaaaacgtcagcaatccc
atcattatagatcaaatgtactgcccgcataacgaatgcaatcgcaagatgccatcaaaa
gttaaaataagcgacgtcatcttcaagaatattcgaggatcgtcaagaacgcccacagcc
gttcaattgacatgcagcagcagcgtaccatgcaagaacgttgaactttctaacgttaac
ctccagtacaccggatctaagggtcctgcaaaatctatttgtacaaatgttaagcctaag
attataggaaagttgattccgagaggatgttaa
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