Manihot esculenta (cassava): 122723261
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Entry
122723261 CDS
T05761
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
122723261
Enzymes [BR:
mesc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
122723261
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarbopepD_reg_2
CarboxypepD_reg
Y_Y_Y
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
122723261
NCBI-ProteinID:
XP_043810976
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Position
3:complement(8570125..8598978)
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AA seq
789 aa
AA seq
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MDWKQCEEQPDYHTKISRVTQHPYQLPSADDLSTESHKWIESRPCSISPTGFADGAIVDG
GGGVLFRFFCRRYVWAAGESVRPVAVLVAGGVSVLMVAGGGVSRASSSLISPHKMGKMHL
LAGSNWPAIGLCFFFFFLIASSAKIPTSKIPSTTKKSSALGVQLQVTDKQVVIDNGIVQV
NFSSPGGDVIGIKYKEMDNVLETKNYENNRGYWDVVWSRPRDSNIFDKVQATKFSIIVQN
EDQVEISFSKIWSPSMDKTTVPLKVDKRYIVRRGSSGLYLYAVMERLKGWPDVDMDQIRV
VFKLQSEKFHYMAISDDRQRVMPMPQDRTTGQPLAYPEAVLLTNPVNPQQKGEVDDKYQY
SCENKDNKVHGWISNDPPVGFWMITPSNEFRDAGPVKQDLTSHVGPIVLNMFGSVHYAGK
DLNTEYRNGEPWKKVFGPVYVYLNSIPPSENPKALWEDAKRQMSTEVKSWPYNFPRSEDF
PSSDQRGNVVGQLVVRDPYINEKLIDASLAYVGLAAPGAVGSWQTEVKGYQFWTQADKKG
SFSIKNIRAGKYSLYAFVPGFLGDYKYNVDVIIQPGSEIKLGVLTYDPPRNGTTLWEIGI
PDRTASEFYVPDANPTLVNKLYIDSPANKFRQYGLWERYTDLYPKNDLIYTVGVSNYAKD
WFFAHVNRKVGNTAYKATTWQIIFELKSVMQSGSYTLQIALASATNSELQVRFNNANVKR
PLFTTRLIGKDNAIARYGIHGLYWFYSIQVPASQLLQGKNTIYLTQTRNGSPFSGIMYDY
IRLEAPTKA
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggattggaagcaatgtgaagagcagcctgattatcacaccaaaatttcgcgagtgacg
caacatccatatcaacttccttcagcagatgatttatccacagaatctcacaagtggatt
gagtcacggccctgtagcatttcgcccacagggtttgccgacggggctattgtggatggt
ggtggcggtgtccttttccgtttcttttgccggcgatatgtctgggcggccggtgagtcg
gtgcgtcctgttgctgtacttgtggccggtggtgtctcggtgttgatggtggctggtgga
ggtgtgtcccgtgcctcgtcatcactaatttctccgcacaaaatgggcaagatgcatttg
cttgctgggtctaactggcctgctatcggtctttgctttttcttcttcttccttattgct
tcctctgcgaagatcccaacaagtaaaattccaagtacaactaaaaagagctcagctctt
ggggtgcagctacaagtaactgataagcaagtggtgattgataatggaattgtccaagtc
aatttctctagtccaggcggtgatgttatcggaattaaatataaagaaatggataacgta
cttgaaaccaagaattatgaaaataatcgaggatactgggatgtggtatggagccgacct
agagattctaacatctttgacaaggtacaagctacaaagtttagtattatagtgcaaaat
gaagaccaagtagagatttcgttctctaagatatggagcccttcaatggataaaaccaca
gttcccttgaaggtagacaaaaggtacatagttcgacgtggaagctcagggctttatctg
tatgctgtaatggaacgcttaaaagggtggcctgacgttgatatggatcaaattagagtg
gttttcaaacttcaaagtgaaaagtttcactacatggcaatatccgatgataggcagaga
gtaatgccaatgcctcaagatcgcaccactggccaacctctagcctatcctgaagctgtt
cttttaacaaatccagtcaaccctcaacaaaaaggagaggtggatgataaataccagtac
tcttgtgagaacaaagacaacaaggtgcatgggtggatatcaaatgacccaccggttgga
ttttggatgatcacacccagtaatgaatttcgcgatgctggccccgtcaagcaagaccta
acctctcatgtggggcctattgttctcaatatgtttggtagtgttcattatgctgggaag
gacttaaatacagagtatcgaaatggagagccatggaagaaagtttttggccctgtttac
gtctatcttaattctattccgccttctgaaaatcccaaagccctttgggaagatgctaaa
agacaaatgtcaactgaagttaaaagctggccatataattttcctcgatctgaagatttc
ccttcttctgatcaacggggaaatgtcgtaggtcaattagtagttcgtgacccatacatc
aatgaaaaattgattgatgcaagtttagcttatgtgggattggcagcaccaggtgctgtg
ggctcatggcaaacagaagtaaagggttaccaattttggactcaagctgacaagaaagga
agtttctcaattaaaaatatcagagctgggaaatatagtttatatgcatttgttcctggt
tttcttggagattacaagtataatgttgatgtcattattcaaccaggatctgagatcaaa
ttgggtgtacttacatatgatcctccaagaaatggtacaactctttgggaaattggcatt
cctgatcgtactgcttctgaattctatgtaccagacgcaaacccaacgctcgtcaacaaa
ttgtatattgatagcccagcaaacaaatttagacaatatggattgtgggaaagatatact
gatctataccctaagaatgatctcatatataccgttggtgttagtaattatgctaaagat
tggttcttcgcccatgttaacagaaaggttggaaatacggcatataaggcaactacatgg
cagatcatatttgaacttaaaagtgtaatgcaaagtggaagttacactttgcaaatagcc
ttggcatcagctactaattctgaacttcaggtgaggttcaacaatgccaatgtcaaacga
cctcttttcacaacaaggctaataggcaaggataatgctattgcaagatacggaattcat
ggtttatattggttctatagcattcaagtaccagcttctcaacttctccaaggaaagaat
acaatttatcttactcagactagaaatggaagcccttttagtggtattatgtatgattat
attcgtttagaagcaccgacaaaagcttaa
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